RNA–Protein interactions for RNA: ENST00000409406.1

RBM4-205, Transcript of RNA binding motif protein 4, human

APPRIS P1 TSL 2 BASIC

Gene RBM4, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-205	ENST00000409406	MEI1	Q5TIA1	1274 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	TAF2	Q6P1X5	1199 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	NOTUM	Q6P988	496 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	TRPM8	Q7Z2W7	1104 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	ERICH1	Q86X53	443 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	RFFL	Q8WZ73	363 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	PRCC	Q92733	491 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	FAM167B	Q9BTA0	163 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	OSBPL1A	Q9BXW6	950 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	SNTG2	Q9NY99	539 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	TMEM59L	Q9UK28	342 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	CAND2	O75155	1236 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	HMGCR	P04035	888 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	ITGB3	P05106	788 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	CFH	P08603	1231 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	CST5	P28325	142 aa	Predicted RBP	13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	FLT3	P36888	993 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	NCALD	P61601	193 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	ZNF699	Q32M78	642 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	SLFN11	Q7Z7L1	901 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	HOMEZ	Q8IX15	550 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	CELF4	Q9BZC1	486 aa	Known RBP	13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	LRRC4C	Q9HCJ2	640 aa		13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.58	□□□□□ -0.23
RBM4-205	ENST00000409406	KRT19	P08727	400 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	WEE2	P0C1S8	567 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	UNG	P13051	313 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	CTCF	P49711	727 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	PAPOLA	P51003	745 aa	Known RBP	13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	BPIFB4	P59827	614 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	ANKRD20A2	Q5SQ80	823 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	UBXN11	Q5T124	520 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	ANKRD20A1	Q5TYW2	823 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	ANKRD20A3	Q5VUR7	823 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	ZMAT2	Q96NC0	199 aa	Known RBP	13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	NXF3	Q9H4D5	531 aa	Known RBP	13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	CISH	Q9NSE2	258 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	ABCF3	Q9NUQ8	709 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	POLI	Q9UNA4	740 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	C2CD2	Q9Y426	696 aa		13.58	□□□□□ -0.24
RBM4-205	ENST00000409406	SART1	O43290	800 aa	Known RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	RTN3	O95197	1032 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	RARA	P10276	462 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	HOXD10	P28358	340 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	AXL	P30530	894 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	TMEM132D	Q14C87	1099 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	CLEC16A	Q2KHT3	1053 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	ALKAL1	Q6UXT8	129 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	SERINC5	Q86VE9	423 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	ZNF677	Q86XU0	584 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	LRRC34	Q8IZ02	419 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	TSC22D3	Q99576	134 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	SAMD15	Q9P1V8	674 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	PIN4	Q9Y237	131 aa	Known RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406		A8MUI8	341 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	UBOX5	O94941	541 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	CYP1A1	P04798	512 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	CHN1	P15882	459 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	CD58	P19256	250 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	GNA15	P30679	374 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	ROR2	Q01974	943 aa	Known RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	TCEAL1	Q15170	157 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	WDR72	Q3MJ13	1102 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	ACAD10	Q6JQN1	1059 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	SCARA5	Q6ZMJ2	495 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	TMC3	Q7Z5M5	1100 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	SESTD1	Q86VW0	696 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	PXYLP1	Q8TE99	480 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	TAF4B	Q92750	862 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	SNX27	Q96L92	541 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	ELAC2	Q9BQ52	826 aa	Known RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	ZSWIM1	Q9BR11	485 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	PLEKHA5	Q9HAU0	1116 aa		13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	NXF1	Q9UBU9	619 aa	Known RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	NOC2L	Q9Y3T9	749 aa	Known RBP	13.57	□□□□□ -0.24
RBM4-205	ENST00000409406	TTC36	A6NLP5	189 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	ATMIN	O43313	823 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	ATP2A2	P16615	1042 aa	Known RBP	13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	CCNG1	P51959	295 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	HADHB	P55084	474 aa	Known RBP	13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	GPC5	P78333	572 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	MRPS6	P82932	125 aa	Known RBP	13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	TAF11	Q15544	211 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	ZBTB6	Q15916	424 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	FAM47C	Q5HY64	1035 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	NT5DC4	Q86YG4	428 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	TEX9	Q8N6V9	391 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	KIF12	Q96FN5	646 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	BCO2	Q9BYV7	579 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	ECT2	Q9H8V3	914 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	VRTN	Q9H8Y1	702 aa		13.56	□□□□□ -0.24
RBM4-205	ENST00000409406	DPP3	Q9NY33	737 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms