RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SPTBN4Q9H254 2564 aa20.66■□□□□ 0.9
SMARCB1-204ENST00000407422 MAN2B1O00754 1011 aa20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 DPYSL4O14531 572 aa20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 CHADO15335 359 aa20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 SYKP43405 635 aa20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 CFAP221Q4G0U5 840 aa20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 SPATA2LQ8IUW3 424 aaPredicted RBP20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 MRPL45Q9BRJ2 306 aaKnown RBP20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 CRTAC1Q9NQ79 661 aa20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 NME7Q9Y5B8 376 aa20.65■□□□□ 0.9
SMARCB1-204ENST00000407422 FAM237AA0A1B0GTK4 181 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 PRR29P0C7W0 189 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 CSH1P0DML2 217 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 CSH2P0DML3 217 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 WARSP23381 471 aaKnown RBP20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 WEE1P30291 646 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 SOX9P48436 509 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 RPL10AP62906 217 aaKnown RBP20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 PSMD2Q13200 908 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 TXNDC8Q6A555 127 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 CMTM8Q8IZV2 173 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 MAB21L3Q8N8X9 362 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 TTC8Q8TAM2 541 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 CSGALNACT1Q8TDX6 532 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 FAM3CQ92520 227 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 KCTD10Q9H3F6 313 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 CDH9Q9ULB4 789 aa20.64■□□□□ 0.9
SMARCB1-204ENST00000407422 ANAPC1Q9H1A4 1944 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 SLC38A8A6NNN8 435 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 NCAM2O15394 837 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 RPN1P04843 607 aaKnown RBP20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 CCNE1P24864 410 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 RPS9P46781 194 aaKnown RBP20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 MYL6P60660 151 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 WDR72Q3MJ13 1102 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 SCN4BQ8IWT1 228 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 GOLGA5Q8TBA6 731 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 MYLPFQ96A32 169 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 FUBP3Q96I24 572 aaKnown RBP eCLIP20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 GOLPH3LQ9H4A5 285 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 GDPD2Q9HCC8 539 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 DMAC2Q9NW81 257 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 OBP2AQ9NY56 170 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 GTSE1Q9NYZ3 720 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 CCL26Q9Y258 94 aa20.64■□□□□ 0.89
SMARCB1-204ENST00000407422 LAMTOR5O43504 91 aa20.63■□□□□ 0.89
SMARCB1-204ENST00000407422 TADA3O75528 432 aa20.63■□□□□ 0.89
SMARCB1-204ENST00000407422 NOL4O94818 638 aa20.63■□□□□ 0.89
SMARCB1-204ENST00000407422 MAGEA9P43362 315 aa20.63■□□□□ 0.89
SMARCB1-204ENST00000407422 TNK2Q07912 1038 aa20.63■□□□□ 0.89
SMARCB1-204ENST00000407422 BPIFB1Q8TDL5 484 aa20.63■□□□□ 0.89
SMARCB1-204ENST00000407422 XYLT2Q9H1B5 865 aa20.63■□□□□ 0.89
SMARCB1-204ENST00000407422 DMXL1Q9Y485 3027 aa20.63■□□□□ 0.89
SMARCB1-204ENST00000407422 LRRIQ3A6PVS8 624 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 MYL1P05976 194 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 BDNFP23560 247 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 GNL1P36915 607 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 KPNA1P52294 538 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 CSTF1Q05048 431 aaKnown RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 MTAPQ13126 283 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 TRPC3Q13507 836 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 ARHGAP29Q52LW3 1261 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 TDRD10Q5VZ19 366 aaKnown RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 C4orf50Q6ZRC1 276 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 CELF5Q8N6W0 485 aaKnown RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 FSIP1Q8NA03 581 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 PARD3BQ8TEW8 1205 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 USP13Q92995 863 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 ELMO3Q96BJ8 720 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 PCED1BQ96HM7 432 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 MYRFLQ96LU7 910 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 SCAND2PQ9GZW5 306 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 SNX25Q9H3E2 840 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 LMAN1LQ9HAT1 526 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 MAGEC2Q9UBF1 373 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 NXF1Q9UBU9 619 aaKnown RBP20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 ATP6V1DQ9Y5K8 247 aa20.62■□□□□ 0.89
SMARCB1-204ENST00000407422 DCHS1Q96JQ0 3298 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 TACC1O75410 805 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 AVPR1AP37288 418 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 MAGEA11P43364 429 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 TNNC1P63316 161 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 CYP27A1Q02318 531 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 TSSK4Q6SA08 328 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 SLC9A9Q8IVB4 645 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 OR6B3Q8NGW1 331 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 RIN3Q8TB24 985 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 MRPS31Q92665 395 aaKnown RBP20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 TRMT2BQ96GJ1 504 aaKnown RBP20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 DPEP3Q9H4B8 488 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 OTOGLQ3ZCN5 2332 aa20.61■□□□□ 0.89
SMARCB1-204ENST00000407422 A0A1W2PQ27 194 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 A0A1W2PQ64 194 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 A0A1W2PQD8 194 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 PDXKO00764 312 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 PHACTR2O75167 634 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 NR3C1P04150 777 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 DDX6P26196 483 aaKnown RBP eCLIP20.6■□□□□ 0.899e-7■■■■■ 33.4
SMARCB1-204ENST00000407422 MLLT6P55198 1093 aaPredicted RBP20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 DLG4P78352 724 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms