RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ACOT1Q86TX2 421 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 SLC47A2Q86VL8 602 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 PLPP6Q8IY26 295 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 ADGRF2Q8IZF7 708 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 SLC39A11Q8N1S5 342 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 RBBP8NLQ8NC74 664 aaPredicted RBP8.9□□□□□ -0.98
GPC3-203ENST00000406757 APPL2Q8NEU8 664 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 PRSS33Q8NF86 280 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 ZNF397Q8NF99 534 aaPredicted RBP8.9□□□□□ -0.98
GPC3-203ENST00000406757 OR8K1Q8NGG5 319 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 SLC20A1Q8WUM9 679 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 AUTS2Q8WXX7 1259 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 IGSF21Q96ID5 467 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 TMEM209Q96SK2 561 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 CHP1Q99653 195 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 PHF7Q9BWX1 381 aaPredicted RBP8.9□□□□□ -0.98
GPC3-203ENST00000406757 SNX25Q9H3E2 840 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 VRTNQ9H8Y1 702 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 AAASQ9NRG9 546 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 ABHD10Q9NUJ1 306 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 GDAP2Q9NXN4 497 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 IMPACTQ9P2X3 320 aa8.9□□□□□ -0.98
GPC3-203ENST00000406757 MYO15AQ9UKN7 3530 aa8.9□□□□□ -0.99
GPC3-203ENST00000406757 A8MXQ7 604 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 M0QZQ0 153 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 C2CD2LO14523 706 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 CFHP08603 1231 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 OR4Q2P0C623 313 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 ODC1P11926 461 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 RPL17P18621 184 aaKnown RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 LAG3P18627 525 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 SP100P23497 879 aaPredicted RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 BRD2P25440 801 aaKnown RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 CA8P35219 290 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 AARSP49588 968 aaKnown RBP eCLIP8.89□□□□□ -0.99
GPC3-203ENST00000406757 RAD23BP54727 409 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 ARPP19P56211 112 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 CBX2Q14781 532 aaPredicted RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 DUSP6Q16828 381 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 RTP2Q5QGT7 225 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 KIAA0319Q5VV43 1072 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 PLPP4Q5VZY2 271 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 LLGL2Q6P1M3 1020 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 WDR59Q6PJI9 974 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 PRSS55Q6UWB4 352 aaPredicted RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 LIMS2Q7Z4I7 341 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 IRF2BP2Q7Z5L9 587 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 NOP9Q86U38 636 aaKnown RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 DNAAF5Q86Y56 855 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 GLYCTKQ8IVS8 523 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 SUGP1Q8IWZ8 645 aaKnown RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 FAM71AQ8IYT1 594 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 TOP6BLQ8N6T0 577 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 C12orf29Q8N999 325 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 SLC4A11Q8NBS3 891 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 SHC3Q92529 594 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 SUSD3Q96L08 255 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 HEXIM2Q96MH2 286 aaKnown RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 RTP3Q9BQQ7 232 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 ZSWIM1Q9BR11 485 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 APOL5Q9BWW9 433 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 EDEM3Q9BZQ6 932 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 HAUS4Q9H6D7 363 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 CYP3A43Q9HB55 503 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 DDX43Q9NXZ2 648 aaKnown RBP8.89□□□□□ -0.99
GPC3-203ENST00000406757 SPG21Q9NZD8 308 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 FBXL5Q9UKA1 691 aa8.89□□□□□ -0.99
GPC3-203ENST00000406757 GOLGA6L6A8MZA4 724 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 TMEM189-UBE2V1I3L0A0 370 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 FSCN2O14926 492 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 CILPO75339 1184 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 TACC1O75410 805 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 CD19P15391 556 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 WARSP23381 471 aaKnown RBP8.88□□□□□ -0.99
GPC3-203ENST00000406757 EIF4A3P38919 411 aaKnown RBP8.88□□□□□ -0.99
GPC3-203ENST00000406757 KLHL30Q0D2K2 578 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 MTF1Q14872 753 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 TSR1Q2NL82 804 aaKnown RBP8.88□□□□□ -0.99
GPC3-203ENST00000406757 HGSNATQ68CP4 663 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 OVOS1Q6IE37 1185 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 RSPO2Q6UXX9 243 aaPredicted RBP8.88□□□□□ -0.99
GPC3-203ENST00000406757 ENOSF1Q7L5Y1 443 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 ZNF571Q7Z3V5 609 aaPredicted RBP8.88□□□□□ -0.99
GPC3-203ENST00000406757 METTL23Q86XA0 190 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 CNGA4Q8IV77 575 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 LRRC8AQ8IWT6 810 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 OR10T2Q8NGX3 314 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 RIN2Q8WYP3 895 aaPredicted RBP8.88□□□□□ -0.99
GPC3-203ENST00000406757 TFAP2BQ92481 460 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 SUSD6Q92537 303 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 TMEM169Q96HH4 297 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 TMEM176AQ96HP8 235 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 DNAJC7Q99615 494 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 CDCA3Q99618 268 aaPredicted RBP8.88□□□□□ -0.99
GPC3-203ENST00000406757 TCF25Q9BQ70 676 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.88□□□□□ -0.993e-14■■□□□ 11.7
GPC3-203ENST00000406757 KCNF1Q9H3M0 494 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 FAM49BQ9NUQ9 324 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 SEPT11Q9NVA2 429 aaKnown RBP8.88□□□□□ -0.99
GPC3-203ENST00000406757 TMLHEQ9NVH6 421 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms