RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 RABL2BQ9UNT1 228 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 NEU2Q9Y3R4 380 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 PI4K2BG5E9Z4 385 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 UBE2Q2LH0YL09 131 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 UCHL3P15374 230 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 KCNA2P16389 499 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 COILP38432 576 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 CASP2P42575 452 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 MMP13P45452 471 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ST13P50502 369 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 NR1H2P55055 460 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TRAF2Q12933 501 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 AUHQ13825 339 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 MYBPC3Q14896 1274 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 NR1D2Q14995 579 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TBC1D25Q3MII6 688 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 SLC45A4Q5BKX6 768 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FIGNQ5HY92 759 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 WDR59Q6PJI9 974 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 RAPH1Q70E73 1250 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FRA10AC1Q70Z53 315 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 KBTBD2Q8IY47 623 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 C1orf131Q8NDD1 294 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 DQX1Q8TE96 717 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 HPS1Q92902 700 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TMA16Q96EY4 203 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 COX4I2Q96KJ9 171 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FAM111AQ96PZ2 611 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FAM118BQ9BPY3 351 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 CCDC28BQ9BUN5 200 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 EHMT1Q9H9B1 1298 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 PCDH18Q9HCL0 1135 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 SLCO1B3Q9NPD5 702 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ARHGEF3Q9NR81 526 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 SYBUQ9NX95 663 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 PI4KBQ9UBF8 816 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 NKX1-2Q9UD57 310 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 SLC12A4Q9UP95 1085 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ORC6Q9Y5N6 252 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FAM237AA0A1B0GTK4 181 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SLC26A4O43511 780 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 KLHL41O60662 606 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 RAG1P15918 1043 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 FLT3P36888 993 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 ARSEP51690 589 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 MFAP3P55082 362 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 OCRLQ01968 901 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 MORF4L2Q15014 288 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 MEA1Q16626 185 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 NDUFA5Q16718 116 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 LRRC8EQ6NSJ5 796 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SATL1Q86VE3 508 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 RHPN2Q8IUC4 686 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 DCAF4Q8WV16 495 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 TRIM63Q969Q1 353 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 GMCL1Q96IK5 515 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 PPP1R36Q96LQ0 422 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SENP7Q9BQF6 1050 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 TMEM79Q9BSE2 394 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 NUP85Q9BW27 656 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 IL17RBQ9NRM6 502 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 C20orf96Q9NUD7 363 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 PCMTD2Q9NV79 361 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SLC12A6Q9UHW9 1150 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 TAGLN3Q9UI15 199 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 RPS6KL1Q9Y6S9 549 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 DNALI1O14645 258 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 DGKIO75912 1065 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 CYP11B2P19099 503 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SLC9A1P19634 815 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 GARSP41250 739 aaKnown RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 CDK8P49336 464 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 DEFA1P59665 94 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 DEFA3P59666 94 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 HIF1AQ16665 826 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 C4orf50Q6ZRC1 276 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 ACAD11Q709F0 780 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 CYFIP1Q7L576 1253 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 EXOC3L1Q86VI1 746 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 APOBEC3FQ8IUX4 373 aaKnown RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SCAIQ8N9R8 606 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SH3TC2Q8TF17 1288 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SKA1Q96BD8 255 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 RMND5BQ96G75 393 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 RPAP3Q9H6T3 665 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 MRPL40Q9NQ50 206 aaKnown RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 DDX4Q9NQI0 724 aaKnown RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 ZNF70Q9UC06 446 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 RSL24D1Q9UHA3 163 aaKnown RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 DDX25Q9UHL0 483 aaKnown RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 BAG5Q9UL15 447 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 ZMYND8Q9ULU4 1186 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 RPL26L1Q9UNX3 145 aaKnown RBP6.11□□□□□ -1.43
HDAC9-203ENST00000406072 LRRC42Q9Y546 428 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 SH3BP5O60239 455 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 COQ9O75208 318 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 ZBTB7AO95365 584 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 HLA-DOAP06340 250 aa6.11□□□□□ -1.43
HDAC9-203ENST00000406072 CASP5P51878 434 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms