RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 UNC93AQ86WB7 457 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 ITFG1Q8TB96 612 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 FAM200AQ8TCP9 573 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 WHAMMQ8TF30 809 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 FUBP3Q96I24 572 aaKnown RBP eCLIP15.53■□□□□ 0.08
CDPF1-203ENST00000404583 FAXDC2Q96IV6 333 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 TNIP3Q96KP6 325 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 TWNKQ96RR1 684 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 MYADMQ96S97 322 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 CRACR2AQ9BSW2 395 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 B3GNT5Q9BYG0 378 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 ABCB6Q9NP58 842 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 CISHQ9NSE2 258 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 FANCLQ9NW38 375 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 USTQ9Y2C2 406 aa15.53■□□□□ 0.08
CDPF1-203ENST00000404583 FAM86C2PA6NEL3 165 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 CILPO75339 1184 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.08
CDPF1-203ENST00000404583 GBP2P32456 591 aaPredicted RBP15.52■□□□□ 0.08
CDPF1-203ENST00000404583 CUL2Q13617 745 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 MAN2A1Q16706 1144 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 ZNF394Q53GI3 561 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 TCP11X2Q5H9J9 407 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 OTOP3Q7RTS5 596 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 DNAJB7Q7Z6W7 309 aaPredicted RBP15.52■□□□□ 0.08
CDPF1-203ENST00000404583 SCN4BQ8IWT1 228 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 CRYBG2Q8N1P7 616 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 C12orf29Q8N999 325 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 TDRD5Q8NAT2 981 aaKnown RBP15.52■□□□□ 0.08
CDPF1-203ENST00000404583 STKLD1Q8NE28 680 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 PSMG2Q969U7 264 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 ACSF2Q96CM8 615 aaPredicted RBP15.52■□□□□ 0.08
CDPF1-203ENST00000404583 TCEAL4Q96EI5 215 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 NT5C1BQ96P26 610 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 TUBGCP2Q9BSJ2 902 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 FUCA2Q9BTY2 467 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 NT5C1AQ9BXI3 368 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 ELOVL4Q9GZR5 314 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 ASB3Q9Y575 518 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 GREB1Q4ZG55 1949 aa15.52■□□□□ 0.08
CDPF1-203ENST00000404583 NRG2O14511 850 aaPredicted RBP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 MYL4P12829 197 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 CCR2P41597 374 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 MYL5Q02045 173 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 VEPH1Q14D04 833 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 VWA3BQ502W6 1294 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 MIIPQ5JXC2 388 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 PRSS36Q5K4E3 855 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 CYP4A22Q5TCH4 519 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 CDKAL1Q5VV42 579 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 PAQR9Q6ZVX9 377 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 PDZD4Q76G19 769 aaPredicted RBP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 ITIH5Q86UX2 942 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 TMC8Q8IU68 726 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 ARHGEF19Q8IW93 802 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 PPM1KQ8N3J5 372 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 AOPEPQ8N6M6 819 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 ING5Q8WYH8 240 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 MED10Q9BTT4 135 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 LRRC3Q9BY71 257 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 ZNF518BQ9C0D4 1074 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 INTS2Q9H0H0 1204 aaKnown RBP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 NDST4Q9H3R1 872 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 ZNF334Q9HCZ1 680 aaPredicted RBP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 AVENQ9NQS1 362 aaPredicted RBP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 ASAH2Q9NR71 780 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 GCNT4Q9P109 453 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 MRPS23Q9Y3D9 190 aaKnown RBP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 CCDC130P13994 396 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 GJA1P17302 382 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 SLC9A1P19634 815 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 EEF1GP26641 437 aaKnown RBP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 GRIK1P39086 918 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 MAGEA11P43364 429 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 CACNA2D1P54289 1103 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 EPHA5P54756 1037 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 RPL10AP62906 217 aaKnown RBP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 MTMR3Q13615 1198 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 NCAPHQ15003 741 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 VSTM1Q6UX27 236 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 RRAGAQ7L523 313 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 RNF135Q8IUD6 432 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 FGF13Q92913 245 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 KAT5Q92993 513 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 FAM49BQ9NUQ9 324 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 TMEM30AQ9NV96 361 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDPF1-203ENST00000404583 LIMD1Q9UGP4 676 aa15.51■□□□□ 0.07
CDPF1-203ENST00000404583 ZNF638Q14966 1978 aaKnown RBP15.5■□□□□ 0.07
CDPF1-203ENST00000404583 DENND4CQ5VZ89 1909 aa15.5■□□□□ 0.07
CDPF1-203ENST00000404583 PES1O00541 588 aaKnown RBP15.5■□□□□ 0.07
CDPF1-203ENST00000404583 ZNF197O14709 1029 aa15.5■□□□□ 0.07
CDPF1-203ENST00000404583 MOSPD3O75425 235 aa15.5■□□□□ 0.07
CDPF1-203ENST00000404583 CEBPBP17676 345 aa15.5■□□□□ 0.07
CDPF1-203ENST00000404583 TBXAS1P24557 533 aaPredicted RBP15.5■□□□□ 0.07
CDPF1-203ENST00000404583 RAD23BP54727 409 aa15.5■□□□□ 0.07
CDPF1-203ENST00000404583 TAF12Q16514 161 aa15.5■□□□□ 0.07
CDPF1-203ENST00000404583 EXOC3L4Q17RC7 722 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms