RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 LAMB3Q13751 1172 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 TRIP4Q15650 581 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 SLC44A2Q8IWA5 706 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 COG1Q8WTW3 980 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 OSBP2Q969R2 916 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 DEFB118Q96PH6 123 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 COQ7Q99807 217 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 MRPL17Q9NRX2 175 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 V9GYQ6 96 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 NEO1Q92859 1461 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 NRXN1Q9ULB1 1477 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 KANSL1LA0AUZ9 987 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 KRT37O76014 449 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 MMP1P03956 469 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CHI3L1P36222 383 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CNTN1Q12860 1018 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 DDX39BQ13838 428 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 AP1M1Q9BXS5 423 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 ZBED6P86452 979 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 GET4Q7L5D6 327 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 MCOLN3Q8TDD5 553 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CPB2Q96IY4 423 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 NUP85Q9BW27 656 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 TRIT1Q9H3H1 467 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 KRCC1Q9NPI7 259 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 MRPL39Q9NYK5 338 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 TRIM10Q9UDY6 481 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 KCNN4O15554 427 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CEP152O94986 1710 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 MCAMP43121 646 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CCT5P48643 541 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 PTPN21Q16825 1174 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 PPM1NQ8N819 430 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 UBA3Q8TBC4 463 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 FAM151AQ8WW52 585 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CLIP3Q96DZ5 547 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 IDI2Q9BXS1 227 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 ZNF556Q9HAH1 456 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 METP08581 1390 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 SLC12A8A0AV02 714 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 IL18RAPO95256 599 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 RHOCP08134 193 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 NCAPHQ15003 741 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 CDC42EP5Q6NZY7 148 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 TMED8Q6PL24 325 aaPredicted RBP11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 BNIPLQ7Z465 357 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 KCNB2Q92953 911 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 EPB41L5Q9HCM4 733 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 SH3GLB2Q9NR46 395 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 ADA2Q9NZK5 511 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 CHURC1-FNTBB4DL54 471 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 NR3C2P08235 984 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 LIFRP42702 1097 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 SESN2P58004 480 aaPredicted RBP11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 RBL2Q08999 1139 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 FAM171A1Q5VUB5 890 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 CCDC60Q8IWA6 550 aaPredicted RBP11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 AGBL3Q8NEM8 1001 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 FANCEQ9HB96 536 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 WWOXQ9NZC7 414 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 FRMPD1Q5SYB0 1578 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 TNS3Q68CZ2 1445 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 CCDC189A1A4V9 331 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 GOLGA8RI6L899 631 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 GHRP10912 638 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 OXCT1P55809 520 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 ELOAQ14241 798 aaKnown RBP11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 UAP1L1Q3KQV9 507 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 USP13Q92995 863 aaPredicted RBP11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 RHBGQ9H310 441 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 MROH8Q9H579 483 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 SMPD4Q9NXE4 827 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 FMR1NBQ8N0W7 255 aaPredicted RBP11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 GLMNQ92990 594 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 REXO5Q96IC2 774 aaKnown RBP11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 VPS50Q96JG6 964 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 SLC13A1Q9BZW2 595 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 PKD2L2Q9NZM6 624 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 KANSL3Q9P2N6 904 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 MRPS23Q9Y3D9 190 aaKnown RBP11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 SESN1Q9Y6P5 492 aa11.4□□□□□ -0.58
CACNA1C-216ENST00000399638 GNRH1P01148 92 aa11.4□□□□□ -0.59
CACNA1C-216ENST00000399638 RFC5P40937 340 aa11.4□□□□□ -0.59
CACNA1C-216ENST00000399638 TADA1Q96BN2 335 aa11.4□□□□□ -0.59
CACNA1C-216ENST00000399638 NARS2Q96I59 477 aaKnown RBP11.4□□□□□ -0.59
CACNA1C-216ENST00000399638 GULP1Q9UBP9 304 aa11.4□□□□□ -0.59
CACNA1C-216ENST00000399638 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 F8W810 466 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 POLR2EP19388 210 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 EIF2S3P41091 472 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 CYTH1Q15438 398 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 PLA2G4FQ68DD2 849 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 NUP93Q8N1F7 819 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 OSCP1Q8WVF1 389 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 MTERF3Q96E29 417 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 STX7O15400 261 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 RASGRP1O95267 797 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms