RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 TSPY1Q01534 308 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 BFSP1Q12934 665 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 ZNF77Q15935 545 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 NFE2Q16621 373 aaPredicted RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 INTS6LQ5JSJ4 861 aaKnown RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 L1TD1Q5T7N2 865 aaKnown RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 N4BP2L1Q5TBK1 243 aaPredicted RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 BRAPQ7Z569 592 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 CAMKK1Q8N5S9 505 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 RASSF8Q8NHQ8 419 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 MRPS31Q92665 395 aaKnown RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 SAAL1Q96ER3 474 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 TRMT2BQ96GJ1 504 aaKnown RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 ZNF560Q96MR9 790 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 CLIC6Q96NY7 704 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 FGFBP2Q9BYJ0 223 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 ECT2Q9H8V3 914 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 KIF9Q9HAQ2 790 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 GDAP2Q9NXN4 497 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 GCNT4Q9P109 453 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 SIX4Q9UIU6 781 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 FBXO2Q9UK22 296 aaPredicted RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 SLC8A2Q9UPR5 921 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 GOLGA8IPA6NC78 632 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 ANTXRLA6NF34 631 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 GOLGA8JA6NMD2 632 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 DRD1P21728 446 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 ZXDBP98169 803 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 FAM160A1Q05DH4 1040 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 MTF1Q14872 753 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 PDGFRLQ15198 375 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 PLK5Q496M5 336 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 FAM171BQ6P995 826 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 LIMS2Q7Z4I7 341 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 TMEM86AQ8N2M4 240 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 CSGALNACT2Q8N6G5 542 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 ACCSQ96QU6 501 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 P2RY13Q9BPV8 354 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 CBWD1Q9BRT8 395 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 DUSP15Q9H1R2 295 aaPredicted RBP12.93□□□□□ -0.34
TFF3-202ENST00000398431 LINC00597Q9H2U6 94 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 SMOC1Q9H4F8 434 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 MRPL44Q9H9J2 332 aaKnown RBP12.93□□□□□ -0.34
TFF3-202ENST00000398431 PDE11AQ9HCR9 933 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 ABCB6Q9NP58 842 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 SEL1LQ9UBV2 794 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 STK17AQ9UEE5 414 aa12.93□□□□□ -0.34
TFF3-202ENST00000398431 SRPRBQ9Y5M8 271 aaKnown RBP12.93□□□□□ -0.34
TFF3-202ENST00000398431 ABCA7Q8IZY2 2146 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 FRMD3A2A2Y4 597 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 HUS1O60921 280 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 ATP2C2O75185 946 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 AKAP3O75969 853 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 GAP43P17677 238 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 GARTP22102 1010 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 LMO2P25791 158 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 RPL10AP62906 217 aaKnown RBP12.92□□□□□ -0.34
TFF3-202ENST00000398431 AMPD2Q01433 879 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 SOWAHAQ2M3V2 549 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 EML3Q32P44 896 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 CFAP221Q4G0U5 840 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 AASDHQ4L235 1098 aaPredicted RBP12.92□□□□□ -0.34
TFF3-202ENST00000398431 CC2D1AQ6P1N0 951 aaPredicted RBP12.92□□□□□ -0.34
TFF3-202ENST00000398431 FAM173BQ6P4H8 233 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 SV2BQ7L1I2 683 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 SYT13Q7L8C5 426 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 LRRC52Q8N7C0 313 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 ARL14EPQ8N8R7 260 aaPredicted RBP12.92□□□□□ -0.34
TFF3-202ENST00000398431 CACTINQ8WUQ7 758 aaKnown RBP12.92□□□□□ -0.34
TFF3-202ENST00000398431 OSCP1Q8WVF1 389 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 HHIPQ96QV1 700 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 PCIF1Q9H4Z3 704 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 UPF2Q9HAU5 1272 aaKnown RBP12.92□□□□□ -0.34
TFF3-202ENST00000398431 OLFML3Q9NRN5 406 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 DUS2Q9NX74 493 aaKnown RBP12.92□□□□□ -0.34
TFF3-202ENST00000398431 CCDC39Q9UFE4 941 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 EXOC7Q9UPT5 735 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
TFF3-202ENST00000398431 PCDHGA5Q9Y5G8 931 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 SNX9Q9Y5X1 595 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 WNT6Q9Y6F9 365 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 MYO16Q9Y6X6 1858 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 CHD8Q9HCK8 2581 aa12.92□□□□□ -0.34
TFF3-202ENST00000398431 A0A087X0B3 334 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 C2orf78A6NCI8 922 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 DCLK1O15075 740 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 PRPF6O94906 941 aaKnown RBP12.91□□□□□ -0.34
TFF3-202ENST00000398431 GCNT3O95395 438 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 LDHAP00338 332 aaKnown RBP12.91□□□□□ -0.34
TFF3-202ENST00000398431 USP17L7P0C7H9 530 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 CCDC192P0DO97 292 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 PMLP29590 882 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 RBP5P82980 135 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 MYL7Q01449 175 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 USP4Q13107 963 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 CUL4AQ13619 759 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 ST3GAL2Q16842 350 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 GAB4Q2WGN9 574 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 FBXO43Q4G163 708 aa12.91□□□□□ -0.34
TFF3-202ENST00000398431 STPG1Q5TH74 334 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms