RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 PDE6CP51160 858 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RARSP54136 660 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 MLLT6P55198 1093 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 BPIFB3P59826 476 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CTXN1P60606 82 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 POU6F2P78424 691 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CD69Q07108 199 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 NSUN2Q08J23 767 aaKnown RBP eCLIP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 STK4Q13043 487 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 DCTN2Q13561 401 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TDGQ13569 410 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 BAK1Q16611 211 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 NFIL3Q16649 462 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 DGKDQ16760 1214 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 NKPD1Q17RQ9 610 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SLC5A9Q2M3M2 681 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TRIM71Q2Q1W2 868 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 MST1LQ2TV78 715 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 BMP2KLQ5H9B9 411 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CCDC158Q5M9N0 1113 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 PRAMEF14Q5SWL7 426 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CD276Q5ZPR3 534 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 MRNIPQ6NTE8 343 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SHQ1Q6PI26 577 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SYNE3Q6ZMZ3 975 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 KIAA0408Q6ZU52 694 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RAPH1Q70E73 1250 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 H1FNTQ75WM6 255 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 LRRC8DQ7L1W4 858 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RTL10Q7L3V2 364 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CATSPER4Q7RTX7 472 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 KRT28Q7Z3Y7 464 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 BMP8AQ7Z5Y6 402 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 ANKS1BQ7Z6G8 1248 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 PXKQ7Z7A4 578 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 UBE2Q1Q7Z7E8 422 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TXNRD3Q86VQ6 643 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TTC30AQ86WT1 665 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RAB11FIP4Q86YS3 637 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RASGRP3Q8IV61 690 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CEP97Q8IW35 865 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CCDC28AQ8IWP9 274 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 FAM20CQ8IXL6 584 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 ADSSL1Q8N142 457 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 NUP93Q8N1F7 819 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 ARL6IP6Q8N6S5 226 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 FAM181AQ8N9Y4 354 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 USP38Q8NB14 1042 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 APPL2Q8NEU8 664 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 OR5AN1Q8NGI8 311 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 ZNF384Q8TF68 577 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 ZNF480Q8WV37 535 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SNX33Q8WV41 574 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RUFY2Q8WXA3 655 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RAPGEF4Q8WZA2 1011 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CFHR4Q92496 578 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 CPT1BQ92523 772 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 USP6NLQ92738 828 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 HOXB13Q92826 284 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 KCNN1Q92952 543 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TOE1Q96GM8 510 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 HHIPL1Q96JK4 782 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SPAG5Q96R06 1193 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SOX7Q9BT81 388 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 AMNQ9BXJ7 453 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 MS4A7Q9GZW8 240 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TWSG1Q9GZX9 223 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SLC25A18Q9H1K4 315 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 OR10A5Q9H207 317 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TP63Q9H3D4 680 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 PRDM13Q9H4Q3 707 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RABEP2Q9H5N1 569 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 BCO1Q9HAY6 547 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 VEZTQ9HBM0 779 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 RXFP1Q9HBX9 757 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 XAB2Q9HCS7 855 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TLR9Q9NR96 1032 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 POLR3BQ9NW08 1133 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SPATA6Q9NWH7 488 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SIDT1Q9NXL6 827 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TBC1D14Q9P2M4 693 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SEL1LQ9UBV2 794 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 DNAI1Q9UI46 699 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 KCND3Q9UK17 655 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 DBR1Q9UK59 544 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 NUDT5Q9UKK9 219 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 DAPP1Q9UN19 280 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 C19orf53Q9UNZ5 99 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 SMG5Q9UPR3 1016 aaKnown RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 WASF3Q9UPY6 502 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 NAALADL1Q9UQQ1 740 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 DNAJC16Q9Y2G8 782 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 TBC1D30Q9Y2I9 924 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 USP15Q9Y4E8 981 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 ZFP37Q9Y6Q3 630 aaPredicted RBP2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 PIAS3Q9Y6X2 628 aa2.32□□□□□ -2.04
HMGN2P39-201ENST00000398005 A0A1W2PR48 441 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 VWA3AA6NCI4 1184 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 FAM170BA6NMN3 283 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 EFCAB8A8MWE9 144 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms