RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CTXN3Q4LDR2 81 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 INTS6LQ5JSJ4 861 aaKnown RBP22.44■■□□□ 1.18
CPNE1-204ENST00000397443 ARHGAP17Q68EM7 881 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 SMYD5Q6GMV2 418 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 FUKQ8N0W3 1084 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 SLC39A11Q8N1S5 342 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 TXLNBQ8N3L3 684 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 PCED1BQ96HM7 432 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 RHOBTB2Q9BYZ6 727 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 TSGA10Q9BZW7 698 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 ADAM22Q9P0K1 906 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 TULP2O00295 520 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 PJA2O43164 708 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 RGS7P49802 495 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 ARPP19P56211 112 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 STILQ15468 1287 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 FAM109BQ6ICB4 259 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-204ENST00000397443 PRSS55Q6UWB4 352 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-204ENST00000397443 LRRTM3Q86VH5 581 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 MCOLN2Q8IZK6 566 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 TTPALQ9BTX7 342 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 B3GNT5Q9BYG0 378 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 LHX5Q9H2C1 402 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 TMLHEQ9NVH6 421 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 TJP2Q9UDY2 1190 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 KIAA1671Q9BY89 1806 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 OAZ2O95190 189 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 MYOGP15173 224 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 GPD2P43304 727 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 PTPN14Q15678 1187 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 CYP4A22Q5TCH4 519 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-204ENST00000397443 MYCBPAPQ8TBZ2 947 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 SPATA18Q8TC71 538 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 PHOSPHO2Q8TCD6 241 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 MYLPFQ96A32 169 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 SPG21Q9NZD8 308 aa22.43■■□□□ 1.18
CPNE1-204ENST00000397443 MOCS3O95396 460 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 TMEM253P0C7T8 217 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 NOP2P46087 812 aaKnown RBP22.42■■□□□ 1.18
CPNE1-204ENST00000397443 PDE4CQ08493 712 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 KIAA1841Q6NSI8 718 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 MON1BQ7L1V2 547 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 ERICH1Q86X53 443 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 CPXM1Q96SM3 734 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 ZNF518BQ9C0D4 1074 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 SYNCQ9H7C4 482 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 KRT82Q9NSB4 513 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 PCDHB12Q9Y5F1 795 aa22.42■■□□□ 1.18
CPNE1-204ENST00000397443 CSPG5O95196 566 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 CDH5P33151 784 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-204ENST00000397443 GPC5P78333 572 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 USP41Q3LFD5 358 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 PTPN20Q4JDL3 420 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 SLC39A12Q504Y0 691 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 ZNF280DQ6N043 979 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 PAQR9Q6ZVX9 377 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 ANKRD52Q8NB46 1076 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 RIN2Q8WYP3 895 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-204ENST00000397443 HNRNPABQ99729 332 aaKnown RBP22.41■■□□□ 1.18
CPNE1-204ENST00000397443 OSGEPQ9NPF4 335 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 AAASQ9NRG9 546 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 CNOT8Q9UFF9 292 aaKnown RBP22.41■■□□□ 1.18
CPNE1-204ENST00000397443 INTUQ9ULD6 942 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 RRM1P23921 792 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 BCAT1P54687 386 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 GNG11P61952 73 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 PDCLQ13371 301 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 PKDCCQ504Y2 493 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 RASIP1Q5U651 963 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 FAM35AQ86V20 835 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 PHF13Q86YI8 300 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-204ENST00000397443 CTTNBP2NLQ9P2B4 639 aa22.41■■□□□ 1.18
CPNE1-204ENST00000397443 KIF5CO60282 957 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 BEST1O76090 585 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 RPL17P18621 184 aaKnown RBP22.4■■□□□ 1.18
CPNE1-204ENST00000397443 MMP8P22894 467 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 DNAJB2P25686 324 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 BST2Q10589 180 aaKnown RBP22.4■■□□□ 1.18
CPNE1-204ENST00000397443 ZNF569Q5MCW4 686 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 PMF1Q6P1K2 205 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 FAM171BQ6P995 826 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 SLC35G2Q8TBE7 412 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 PGLYRP2Q96PD5 576 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 UBE2OQ9C0C9 1292 aaKnown RBP22.4■■□□□ 1.18
CPNE1-204ENST00000397443 MTUS1Q9ULD2 1270 aa22.4■■□□□ 1.18
CPNE1-204ENST00000397443 AP1G2O75843 785 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 LINC00271P0C7V0 271 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 BDNFP23560 247 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 MAP3K7CLP57077 242 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 RSPO2Q6UXX9 243 aaPredicted RBP22.39■■□□□ 1.18
CPNE1-204ENST00000397443 ZNF662Q6ZS27 426 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 NYAP1Q6ZVC0 841 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 SPRED2Q7Z698 418 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 AUTS2Q8WXX7 1259 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 ZNF592Q92610 1267 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 NOX5Q96PH1 765 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 PKMYT1Q99640 499 aa22.39■■□□□ 1.18
CPNE1-204ENST00000397443 RRAGDQ9NQL2 400 aaPredicted RBP22.39■■□□□ 1.18
CPNE1-204ENST00000397443 CAPN6Q9Y6Q1 641 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms