RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 RNF40O75150 1001 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 TADA3O75528 432 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 LDHAP00338 332 aaKnown RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 ITGB3P05106 788 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 TCF3P15923 654 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 GAP43P17677 238 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 GARTP22102 1010 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 POLR2BP30876 1174 aaKnown RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 FAM160A1Q05DH4 1040 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 CCDC6Q16204 474 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 PLK5Q496M5 336 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 CFAP221Q4G0U5 840 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 INTS6LQ5JSJ4 861 aaKnown RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 L1TD1Q5T7N2 865 aaKnown RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 STPG1Q5TH74 334 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 SDHAF4Q5VUM1 108 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 DPH6Q7L8W6 267 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 BRSK2Q8IWQ3 736 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 CSGALNACT2Q8N6G5 542 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 STKLD1Q8NE28 680 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 RASSF8Q8NHQ8 419 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 OSCP1Q8WVF1 389 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 ACCSQ96QU6 501 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 DUSP15Q9H1R2 295 aaPredicted RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 TMEM206Q9H813 350 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 ECT2Q9H8V3 914 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 MRPL44Q9H9J2 332 aaKnown RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 OLFML3Q9NRN5 406 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 GCNT4Q9P109 453 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 CCDC39Q9UFE4 941 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 FBXO2Q9UK22 296 aaPredicted RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 MAGED2Q9UNF1 606 aaPredicted RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 PCDHB13Q9Y5F0 798 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 SRPRBQ9Y5M8 271 aaKnown RBP12.82□□□□□ -0.36
SYNE4-203ENST00000397428 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 EPG5Q9HCE0 2579 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 OBSL1O75147 1896 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 EML5Q05BV3 1969 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 USP17L7P0C7H9 530 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 CCDC192P0DO97 292 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 ACAT1P24752 427 aaKnown RBP12.81□□□□□ -0.36
SYNE4-203ENST00000397428 PMLP29590 882 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 MAGEA11P43364 429 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 LHX1P48742 406 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 RBP5P82980 135 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 SHC2P98077 582 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 MYL7Q01449 175 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 MTF1Q14872 753 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 ZNF77Q15935 545 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 ST3GAL2Q16842 350 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 SOWAHAQ2M3V2 549 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 AASDHQ4L235 1098 aaPredicted RBP12.81□□□□□ -0.36
SYNE4-203ENST00000397428 NAIF1Q69YI7 327 aaPredicted RBP12.81□□□□□ -0.36
SYNE4-203ENST00000397428 IL31Q6EBC2 164 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 SV2BQ7L1I2 683 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 OSTM1Q86WC4 334 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 CPA6Q8N4T0 437 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 TOP6BLQ8N6T0 577 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 C12orf50Q8NA57 414 aaPredicted RBP12.81□□□□□ -0.36
SYNE4-203ENST00000397428 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 FUBP3Q96I24 572 aaKnown RBP eCLIP12.81□□□□□ -0.36
SYNE4-203ENST00000397428 LSM14BQ9BX40 385 aaKnown RBP12.81□□□□□ -0.36
SYNE4-203ENST00000397428 LINC00597Q9H2U6 94 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 VPS45Q9NRW7 570 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
SYNE4-203ENST00000397428 TBC1D7Q9P0N9 293 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 SIX4Q9UIU6 781 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 ITGA11Q9UKX5 1188 aa12.81□□□□□ -0.36
SYNE4-203ENST00000397428 ZNF638Q14966 1978 aaKnown RBP12.81□□□□□ -0.36
SYNE4-203ENST00000397428 TRAV19A0A0A6YYK7 116 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 FRMD3A2A2Y4 597 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 ATP2C2O75185 946 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 HDCP19113 662 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 CASP5P51878 434 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 EML3Q32P44 896 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 ARL14EPQ8N8R7 260 aaPredicted RBP12.8□□□□□ -0.36
SYNE4-203ENST00000397428 CD101Q93033 1021 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 ATP2A3Q93084 1043 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 SAAL1Q96ER3 474 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 SPATA17Q96L03 361 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 CEP295NLQ96MC4 621 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 PDE11AQ9HCR9 933 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 RBAKQ9NYW8 714 aaPredicted RBP12.8□□□□□ -0.36
SYNE4-203ENST00000397428 SNX9Q9Y5X1 595 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 ACACBO00763 2458 aa12.8□□□□□ -0.36
SYNE4-203ENST00000397428 GOLGA8IPA6NC78 632 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 C2orf78A6NCI8 922 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 GOLGA8JA6NMD2 632 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 HCRTO43612 131 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 RHOBTB1O94844 696 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 APBB3O95704 486 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 PFKLP17858 780 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 LMO2P25791 158 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 PCSK1P29120 753 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 MPLP40238 635 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 ZXDBP98169 803 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms