RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 UBA3Q8TBC4 463 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 PANX2Q96RD6 677 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 ANTXR1Q9H6X2 564 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 TMEM138Q9NPI0 162 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 STAU1O95793 577 aaKnown RBP12.8□□□□□ -0.36
SMU1-201ENST00000397149 ITGB6P18564 788 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 PRKD2Q9BZL6 878 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 ZCCHC17Q9NP64 241 aaKnown RBP12.8□□□□□ -0.36
SMU1-201ENST00000397149 MIEF1Q9NQG6 463 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 PCP4L1A6NKN8 68 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 FAM20BO75063 409 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 PDE8BO95263 885 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 WEE2P0C1S8 567 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 HNMTP50135 292 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 SCNN1BP51168 640 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 SPP2Q13103 211 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 FBXO42Q6P3S6 717 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 CYP4Z2PQ8N1L4 340 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 CARNMT1Q8N4J0 409 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 CASP10Q92851 521 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 ING3Q9NXR8 418 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 TRPM5Q9NZQ8 1165 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 DAPK2Q9UIK4 370 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 ARL2BPQ9Y2Y0 163 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 DYRK1BQ9Y463 629 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 ERP27Q96DN0 273 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 SNX13Q9Y5W8 968 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 COASYQ13057 564 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 ZSWIM5Q9P217 1185 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 PRKAG3Q9UGI9 489 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 VAV3Q9UKW4 847 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 ABATP80404 500 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 SNX17Q15036 470 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 CYP4X1Q8N118 509 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 ENKURQ8TC29 256 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 C18orf8Q96DM3 657 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 OXCT2Q9BYC2 517 aaPredicted RBP12.79□□□□□ -0.36
SMU1-201ENST00000397149 SH3BP4Q9P0V3 963 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 PSMD3O43242 534 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 ACSL4O60488 711 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 TFRCP02786 760 aaKnown RBP12.79□□□□□ -0.36
SMU1-201ENST00000397149 ZCCHC18P0CG32 403 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 EIF2B2P49770 351 aaKnown RBP12.79□□□□□ -0.36
SMU1-201ENST00000397149 KCNB1Q14721 858 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 MCRS1Q96EZ8 462 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 MPP4Q96JB8 637 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 ATP6V1G3Q96LB4 118 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 UNKQ9C0B0 810 aaKnown RBP12.79□□□□□ -0.36
SMU1-201ENST00000397149 SLITRK2Q9H156 845 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 STX7O15400 261 aaKnown RBP12.79□□□□□ -0.36
SMU1-201ENST00000397149 ATG7O95352 703 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 HALP42357 657 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 AMHR2Q16671 573 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 POTEAQ6S8J7 498 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 NSUN6Q8TEA1 469 aaKnown RBP12.79□□□□□ -0.36
SMU1-201ENST00000397149 ABHD10Q9NUJ1 306 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 DUSP12Q9UNI6 340 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 CAPN15O75808 1086 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 KCNA6P17658 529 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 JAK1P23458 1154 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 CYP2C19P33261 490 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 GLRBP48167 497 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 POU5F1Q01860 360 aaKnown RBP12.79□□□□□ -0.36
SMU1-201ENST00000397149 KLHL12Q53G59 568 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 RPTNQ6XPR3 784 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 C3orf62Q6ZUJ4 267 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 SCAIQ8N9R8 606 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 DNAJC9Q8WXX5 260 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 KLHL3Q9UH77 587 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 KIF24Q5T7B8 1368 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 NR5A2O00482 541 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 ASNSP08243 561 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 NCAM1P13591 858 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 VCLP18206 1134 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 GRK4P32298 578 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 BIKQ13323 160 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
SMU1-201ENST00000397149 NPATQ14207 1427 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 ASXL1Q8IXJ9 1541 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 H3BN98 237 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 DYNC1LI2O43237 492 aaPredicted RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 SOAT2O75908 522 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 ACSF2Q96CM8 615 aaPredicted RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 TRIM51Q9BSJ1 452 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 NMRK1Q9NWW6 199 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 LYVE1Q9Y5Y7 322 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 NPHP3-ACAD11A0A0J9YXS1 232 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 MEI4A8MW99 385 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 TIMM44O43615 452 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 VAV1P15498 845 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 PAICSP22234 425 aaKnown RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 FGD3Q5JSP0 725 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 DAB2IPQ5VWQ8 1189 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 SETD3Q86TU7 594 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms