RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 GTSE1Q9NYZ3 720 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 CCL26Q9Y258 94 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 LAMTOR5O43504 91 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 EXOC3O60645 756 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 PRR29P0C7W0 189 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 PCSK1P29120 753 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 NDUFA8P51970 172 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 KRT85P78386 507 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 TNK2Q07912 1038 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 SCN4BQ8IWT1 228 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 CMTM8Q8IZV2 173 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 ADSSL1Q8N142 457 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 SPATA18Q8TC71 538 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 ELMO3Q96BJ8 720 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 LMAN1LQ9HAT1 526 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 ABCB6Q9NP58 842 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 KIF26AQ9ULI4 1882 aaPredicted RBP19.6■□□□□ 0.73
FXN-203ENST00000396366 ZNF292O60281 2723 aa19.6■□□□□ 0.73
FXN-203ENST00000396366 FAM186AA6NE01 2351 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 FANCMQ8IYD8 2048 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 NCAM2O15394 837 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 CSH1P0DML2 217 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 CSH2P0DML3 217 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 WARSP23381 471 aaKnown RBP19.59■□□□□ 0.73
FXN-203ENST00000396366 WEE1P30291 646 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 RPS9P46781 194 aaKnown RBP19.59■□□□□ 0.73
FXN-203ENST00000396366 KPNA1P52294 538 aaPredicted RBP19.59■□□□□ 0.73
FXN-203ENST00000396366 MYL6P60660 151 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 RPL10AP62906 217 aaKnown RBP19.59■□□□□ 0.73
FXN-203ENST00000396366 CFAP221Q4G0U5 840 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 WDR44Q5JSH3 913 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 TXNDC11Q6PKC3 985 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 BPIFB1Q8TDL5 484 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 MYLPFQ96A32 169 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 EXOC1Q9NV70 894 aa19.59■□□□□ 0.73
FXN-203ENST00000396366 CGNQ9P2M7 1197 aaKnown RBP19.59■□□□□ 0.73
FXN-203ENST00000396366 ZNF638Q14966 1978 aaKnown RBP19.59■□□□□ 0.73
FXN-203ENST00000396366 TADA3O75528 432 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 NOL4O94818 638 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 BDNFP23560 247 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 GNL1P36915 607 aaPredicted RBP19.58■□□□□ 0.72
FXN-203ENST00000396366 WDR72Q3MJ13 1102 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 ARHGAP29Q52LW3 1261 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 CELF5Q8N6W0 485 aaKnown RBP19.58■□□□□ 0.72
FXN-203ENST00000396366 RIN3Q8TB24 985 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 USP13Q92995 863 aaPredicted RBP19.58■□□□□ 0.72
FXN-203ENST00000396366 CYP2S1Q96SQ9 504 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 KCTD10Q9H3F6 313 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 DPEP3Q9H4B8 488 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 GDPD2Q9HCC8 539 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 RBM12Q9NTZ6 932 aaKnown RBP19.58■□□□□ 0.72
FXN-203ENST00000396366 DMAC2Q9NW81 257 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 OBP2AQ9NY56 170 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 MAGEC2Q9UBF1 373 aaPredicted RBP19.58■□□□□ 0.72
FXN-203ENST00000396366 NXF1Q9UBU9 619 aaKnown RBP19.58■□□□□ 0.72
FXN-203ENST00000396366 FBXO4Q9UKT5 387 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 CDH9Q9ULB4 789 aa19.58■□□□□ 0.72
FXN-203ENST00000396366 SPECC1L-ADORA2AF8WAN1 911 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 RPN1P04843 607 aaKnown RBP19.57■□□□□ 0.72
FXN-203ENST00000396366 CHRNB1P11230 501 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 MAGEA9P43362 315 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 SYKP43405 635 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 DLG4P78352 724 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 CYP27A1Q02318 531 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 PSMD2Q13200 908 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 MON1AQ86VX9 555 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 OR6B3Q8NGW1 331 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 FUBP3Q96I24 572 aaKnown RBP eCLIP19.57■□□□□ 0.72
FXN-203ENST00000396366 MYRFLQ96LU7 910 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 SLC22A12Q96S37 553 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 XYLT2Q9H1B5 865 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 SNX25Q9H3E2 840 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 GOLPH3LQ9H4A5 285 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 GKN1Q9NS71 199 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 GREB1Q4ZG55 1949 aa19.57■□□□□ 0.72
FXN-203ENST00000396366 FAM237AA0A1B0GTK4 181 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 LRRIQ3A6PVS8 624 aaPredicted RBP19.56■□□□□ 0.72
FXN-203ENST00000396366 LMNAP02545 664 aaKnown RBP19.56■□□□□ 0.72
FXN-203ENST00000396366 AVPR1AP37288 418 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 MLLT6P55198 1093 aaPredicted RBP19.56■□□□□ 0.72
FXN-203ENST00000396366 USP46P62068 366 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 TRPC3Q13507 836 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 GAS6Q14393 721 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 ZNF528Q3MIS6 628 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 MDH1BQ5I0G3 518 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 TDRD10Q5VZ19 366 aaKnown RBP19.56■□□□□ 0.72
FXN-203ENST00000396366 TRIM68Q6AZZ1 485 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 C4orf50Q6ZRC1 276 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 PARD3BQ8TEW8 1205 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 MRPS31Q92665 395 aaKnown RBP19.56■□□□□ 0.72
FXN-203ENST00000396366 TRMT2BQ96GJ1 504 aaKnown RBP19.56■□□□□ 0.72
FXN-203ENST00000396366 PCED1BQ96HM7 432 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 CHRDQ9H2X0 955 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 TRPC7Q9HCX4 862 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 USP25Q9UHP3 1055 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 EP300Q09472 2414 aaPredicted RBP19.56■□□□□ 0.72
FXN-203ENST00000396366 GVINP1Q7Z2Y8 2422 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 SPTBN4Q9H254 2564 aa19.56■□□□□ 0.72
FXN-203ENST00000396366 PTPRDP23468 1912 aa19.55■□□□□ 0.72
FXN-203ENST00000396366 OTOL1A6NHN0 477 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms