RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PDZD4Q76G19 769 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 CPNE8Q86YQ8 564 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 SIAH1Q8IUQ4 282 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 CDKL3Q8IVW4 592 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 DCLRE1BQ9H816 532 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 SLC38A10Q9HBR0 1119 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 APOBEC2Q9Y235 224 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 MAST2Q6P0Q8 1798 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 APOL1O14791 398 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 OGTO15294 1046 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 ATP9AO75110 1047 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 MAP7D1Q3KQU3 841 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 FKBP1CQ5VVH2 108 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 PMM2O15305 246 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 ENO1P06733 434 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 SSTR1P30872 391 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 AP2B1P63010 937 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 BNIP1Q12981 228 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 PRUNE1Q86TP1 453 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 TRABD2AQ86V40 505 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 ZNF75CPQ92670 426 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 INPP5DQ92835 1189 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 ACAP3Q96P50 834 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 SLITRK1Q96PX8 696 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 NDE1Q9NXR1 346 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 TRIM49D1C9J1S8 452 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 VHLP40337 213 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 PHKA2P46019 1235 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 POLE2P56282 527 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 MYL6P60660 151 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 PDK4Q16654 411 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 ANKRD20A2Q5SQ80 823 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 ANKRD20A1Q5TYW2 823 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 LLGL2Q6P1M3 1020 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 BZW1Q7L1Q6 419 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 ZSWIM2Q8NEG5 633 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 CRYGNQ8WXF5 182 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 SEPT1Q8WYJ6 367 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 PPP1R16BQ96T49 567 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 TTC1Q99614 292 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 LBHD1Q9BQE6 289 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 FRMD8Q9BZ67 464 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 FAM96AQ9H5X1 160 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 MYOZ2Q9NPC6 264 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 SLC12A4Q9UP95 1085 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 COQ4Q9Y3A0 265 aa12.21□□□□□ -0.45
UBE2D3-209ENST00000394804 CREB1P16220 341 aa12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 RPA3P35244 121 aaPredicted RBP12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 SH3BGRP55822 239 aaPredicted RBP12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 ATP13A4Q4VNC1 1196 aa12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 WASHC2DQ5SRD0 308 aa12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 LRRC38Q5VT99 294 aa12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 TDRD10Q5VZ19 366 aaKnown RBP12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 RFX8Q6ZV50 586 aa12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 ANO5Q75V66 913 aa12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 WDR49Q8IV35 697 aa12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 TTC39CQ8N584 583 aa12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 DRG1Q9Y295 367 aaKnown RBP12.21□□□□□ -0.46
UBE2D3-209ENST00000394804 SYNJ2BP-COX16A0A087WUM0 186 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 F8VP50 259 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 KDSRQ06136 332 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 TTC39BQ5VTQ0 682 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 IER5Q5VY09 327 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 LRRC6Q86X45 466 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 TCP10LQ8TDR4 215 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 SLCO2A1Q92959 643 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 MIEF2Q96C03 454 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 ZBTB45Q96K62 511 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 FAM84AQ96KN4 292 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 COX16Q9P0S2 106 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 B2RBV5 119 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 CBX6O95503 412 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 TAC1P20366 129 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 IRX1P78414 480 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 DNAL1Q4LDG9 190 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 HEATR6Q6AI08 1181 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 ALLCQ8N6M5 410 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 GPR88Q9GZN0 384 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 Q9H521 79 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 RNPEPL1Q9HAU8 725 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 LGALS13Q9UHV8 139 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 TRIM33Q9UPN9 1127 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 C19orf81C9J6K1 198 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 ETS1P14921 441 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 ADRA1DP25100 572 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 EPHB2P29323 1055 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 PTP4A2Q12974 167 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 RCN1Q15293 331 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 GCOM2Q9BZD3 368 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 MARCOQ9UEW3 520 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-209ENST00000394804 CAPN9O14815 690 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 MRPS9P82933 396 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 TCEAL1Q15170 157 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms