RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 H3BRJ5 948 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 CST8O60676 142 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 TJP3O95049 919 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 RASSF2P50749 326 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 ARFIP2P53365 341 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 VCPP55072 806 aaKnown RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 ARL4CP56559 192 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 FAAP100Q0VG06 881 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 PGM5Q15124 567 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 TMEM132AQ24JP5 1023 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 PRPF39Q86UA1 669 aaKnown RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 PALM2Q8IXS6 379 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 C4orf19Q8IY42 314 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 KIAA0319LQ8IZA0 1049 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 ENDOVQ8N8Q3 282 aaKnown RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 POLR3FQ9H1D9 316 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 hCG_1818297A0A087WSY0 165 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 MEI4A8MW99 385 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 F5H423 210 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 LIN7AO14910 233 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 UGT1A9O60656 530 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 C4BPAP04003 597 aaKnown RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 TNFSF9P41273 254 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 ZACNQ401N2 412 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 SLC45A4Q5BKX6 768 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 CDR2LQ86X02 465 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 ZNF526Q8TF50 670 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 PTCD3Q96EY7 689 aaKnown RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 TTC25Q96NG3 672 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 BTBD10Q9BSF8 475 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 SHCBP1LQ9BZQ2 653 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 UGT1A7Q9HAW7 530 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 UGT1A10Q9HAW8 530 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 UGT1A8Q9HAW9 530 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 PAPOLBQ9NRJ5 636 aaKnown RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 HERC5Q9UII4 1024 aaKnown RBP18.9■□□□□ 0.62
ERCC2-201ENST00000391941 FZD1Q9UP38 647 aa18.9■□□□□ 0.62
ERCC2-201ENST00000391941 SIGLEC16A6NMB1 481 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 LPXNO60711 386 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 TROVE2P10155 538 aaKnown RBP eCLIP18.89■□□□□ 0.61
ERCC2-201ENST00000391941 RPL22P35268 128 aaKnown RBP18.89■□□□□ 0.61
ERCC2-201ENST00000391941 BMPR2Q13873 1038 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 ZBTB33Q86T24 672 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 USP37Q86T82 979 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 TREML1Q86YW5 311 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 PDCD7Q8N8D1 485 aaKnown RBP18.89■□□□□ 0.61
ERCC2-201ENST00000391941 JOSD2Q8TAC2 188 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 FAM161BQ96MY7 647 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 ACAP3Q96P50 834 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 FOXP3Q9BZS1 431 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 SLC13A1Q9BZW2 595 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 RBAKQ9NYW8 714 aaPredicted RBP18.89■□□□□ 0.61
ERCC2-201ENST00000391941 SORBS2O94875 1100 aaKnown RBP18.89■□□□□ 0.61
ERCC2-201ENST00000391941 CDKN2BP42772 138 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 TSNAXIP1Q2TAA8 658 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 KBTBD12Q3ZCT8 623 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 ZNF677Q86XU0 584 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 DCAKDQ8WVC6 231 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 DCLRE1BQ9H816 532 aa18.89■□□□□ 0.61
ERCC2-201ENST00000391941 MYH9P35579 1960 aaKnown RBP18.88■□□□□ 0.61
ERCC2-201ENST00000391941 TMEM191CA6NGB0 347 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 LRRIQ4A6NIV6 560 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 TMEM191BP0C7N4 346 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 RFC1P35251 1148 aaPredicted RBP18.88■□□□□ 0.61
ERCC2-201ENST00000391941 MMRN1Q13201 1228 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 DNAJC24Q6P3W2 148 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 C15orf39Q6ZRI6 1047 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 ZCCHC23Q6ZST2 131 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 DPH6Q7L8W6 267 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 CCDC60Q8IWA6 550 aaPredicted RBP18.88■□□□□ 0.61
ERCC2-201ENST00000391941 EFCAB3Q8N7B9 438 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 TFAP2BQ92481 460 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 FAM136AQ96C01 138 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 CFAP36Q96G28 342 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 TIPINQ9BVW5 301 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 MRPL47Q9HD33 250 aaKnown RBP18.88■□□□□ 0.61
ERCC2-201ENST00000391941 PARVAQ9NVD7 372 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 XPO7Q9UIA9 1087 aaKnown RBP18.88■□□□□ 0.61
ERCC2-201ENST00000391941 ZNRF3Q9ULT6 936 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 DNAH12Q6ZR08 3092 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 ICAM1P05362 532 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 ESRRAP11474 423 aaPredicted RBP18.88■□□□□ 0.61
ERCC2-201ENST00000391941 ELK3P41970 407 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 SLC18A1P54219 525 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 LMNB2Q03252 620 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 MORF4L2Q15014 288 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 EFHC2Q5JST6 749 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 ARMC3Q5W041 872 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 SLC30A9Q6PML9 568 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 LRRC74BQ6ZQY2 392 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 FAM160B2Q86V87 743 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 ARFGAP1Q8N6T3 406 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 BANPQ8N9N5 519 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 MZB1Q8WU39 189 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 HSPH1Q92598 858 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 TTC1Q99614 292 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 TRIM55Q9BYV6 548 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 FBXO40Q9UH90 709 aa18.88■□□□□ 0.61
ERCC2-201ENST00000391941 AGO2Q9UKV8 859 aaKnown RBP18.88■□□□□ 0.61
ERCC2-201ENST00000391941 ANKRD31Q8N7Z5 1873 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms