RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 GTF2H1P32780 548 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 PMS1P54277 932 aaKnown RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 CDH8P55286 799 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 STARD6P59095 220 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 RPL10AP62906 217 aaKnown RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 TNNC1P63316 161 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 BIRC3Q13489 604 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 MAPRE1Q15691 268 aaKnown RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 DDR2Q16832 855 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 ZNF699Q32M78 642 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 ZNF667Q5HYK9 610 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 STXBP5Q5T5C0 1151 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 ANKRD40Q6AI12 368 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 FOXR2Q6PJQ5 311 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 VSTM1Q6UX27 236 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 VITQ6UXI7 678 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 CLEC17AQ6ZS10 378 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 SIX5Q8N196 739 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 ZSCAN18Q8TBC5 510 aaPredicted RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 RSPRY1Q96DX4 576 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 TRMT2BQ96GJ1 504 aaKnown RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 DDX23Q9BUQ8 820 aaKnown RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 TRPV5Q9NQA5 729 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 NXF1Q9UBU9 619 aaKnown RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 FBXL21Q9UKT6 434 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 COL4A3Q01955 1670 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 PATJQ8NI35 1801 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 MYOFQ9NZM1 2061 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 PPP1R3GB7ZBB8 358 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 ARNTLO00327 626 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 CETN3O15182 167 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 PI15O43692 258 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 KINO60870 393 aaKnown RBP12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 TRIM49P0CI25 452 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 TRIM49CP0CI26 452 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 CSH1P0DML2 217 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 CSH2P0DML3 217 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 AOC1P19801 751 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 CCNE1P24864 410 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 CDC25CP30307 473 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 VIPR2P41587 438 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 NLRP12P59046 1061 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 PSMC1P62191 440 aaKnown RBP12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 UBE2HP62256 183 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 MORC3Q14149 939 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 SDHAF4Q5VUM1 108 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 ARID3BQ8IVW6 561 aaPredicted RBP12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 MFSD6LQ8IWD5 586 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 PRSS33Q8NF86 280 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 OR6B3Q8NGW1 331 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 E2F7Q96AV8 911 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 ELMO3Q96BJ8 720 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 PCED1BQ96HM7 432 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 SPATA17Q96L03 361 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 LRRC3BQ96PB8 259 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 PRRX2Q99811 253 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 SLC46A2Q9BY10 475 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 BCO2Q9BYV7 579 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 SNX25Q9H3E2 840 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 DPEP3Q9H4B8 488 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 TASP1Q9H6P5 420 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 TMEM8AQ9HCN3 771 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 TMEM30AQ9NV96 361 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 MAGEC2Q9UBF1 373 aaPredicted RBP12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 ZMYM5Q9UJ78 669 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 FAM186AA6NE01 2351 aa12.16□□□□□ -0.46
IGHV4-28-201ENST00000390612 ATG2BQ96BY7 2078 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 FRYLO94915 3013 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 ZFHX2Q9C0A1 2572 aaPredicted RBP12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 SLC38A8A6NNN8 435 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 TADA3O75528 432 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 KRT13P13646 458 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 BDNFP23560 247 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 ASPAP45381 313 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 GCLMP48507 274 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 FKBP3Q00688 224 aaKnown RBP12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 PFKPQ01813 784 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 PRKCQQ04759 706 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 FCHO2Q0JRZ9 810 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 TCF15Q12870 199 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 SLC44A4Q53GD3 710 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 MDH1BQ5I0G3 518 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 GPR158Q5T848 1215 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 PAQR9Q6ZVX9 377 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 B3GALNT2Q8NCR0 500 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 FAM200AQ8TCP9 573 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 TAS1R2Q8TE23 839 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 DEPDC1BQ8WUY9 529 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 EEF2KMTQ96G04 330 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 DUSP9Q99956 384 aaKnown RBP12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 TRMT61BQ9BVS5 477 aaKnown RBP12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 TTLL2Q9BWV7 592 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms