RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 SGSM3Q96HU1 749 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 CHP1Q99653 195 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 RIC8BQ9NVN3 520 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 APOA4P06727 396 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 WEE2P0C1S8 567 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 FNTAP49354 379 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 CLEC16AQ2KHT3 1053 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 AGBL2Q5U5Z8 902 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 C4orf22Q6V702 233 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 PRAMEF18Q5VWM3 479 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 EME1Q96AY2 570 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 KCNK16Q96T55 309 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 GID8Q9NWU2 228 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 SPATA31A5Q5VU36 1347 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 SPATA31A7Q8IWB4 1347 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 LRG1P02750 347 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 MAGEA4P43358 317 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 GPRASP2Q96D09 838 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 JMJD4Q9H9V9 463 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 S100A5P33763 92 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 FCGRTP55899 365 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 MTFR1Q15390 333 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 ZNF669Q96BR6 464 aaPredicted RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 METTL5Q9NRN9 209 aaKnown RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 H2AFYO75367 372 aaKnown RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 CAPRIN2Q6IMN6 1127 aaKnown RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 C9orf72Q96LT7 481 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 CCT8L2Q96SF2 557 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 PRG3Q9Y2Y8 225 aaPredicted RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 AIM2O14862 343 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 MSH4O15457 936 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 ANTXR2P58335 489 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 ACTN3Q08043 901 aaPredicted RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 LVRNQ6Q4G3 990 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 ATG4CQ96DT6 458 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 STAMBPL1Q96FJ0 436 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 RGS2P41220 211 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 TRPC1P48995 793 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 NCALDP61601 193 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 C3orf62Q6ZUJ4 267 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 PRPF39Q86UA1 669 aaKnown RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 CDK5RAP1Q96SZ6 601 aaKnown RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 TARS2Q9BW92 718 aaKnown RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 WWOXQ9NZC7 414 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 RPLP2P05387 115 aaKnown RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 C1orf131Q8NDD1 294 aaKnown RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 SEPT8Q92599 483 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 TMEM131LA2VDJ0 1609 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 AKAP10O43572 662 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 GYPCP04921 128 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 TAF6P49848 677 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 DENND5BQ6ZUT9 1274 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 AGPAT3Q9NRZ7 376 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 YY1P25490 414 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 TCF7P36402 384 aaPredicted RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 HUNKP57058 714 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 EPC2Q52LR7 807 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 ZMAT2Q96NC0 199 aaKnown RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 FAM118BQ9BPY3 351 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 IL1RL2Q9HB29 575 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 KLC4Q9NSK0 619 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 NMRK1Q9NWW6 199 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 ANXA9O76027 345 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 HNRNPH2P55795 449 aaKnown RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 LRRC74AQ0VAA2 488 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 PLEKHM3Q6ZWE6 761 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 TMEM120BA0PK00 339 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 ADCK1Q86TW2 530 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 ERP27Q96DN0 273 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 CNDP1Q96KN2 507 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 RPA1P27694 616 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 DAGLBQ8NCG7 672 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 FAM167BQ9BTA0 163 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 EPC1Q9H2F5 836 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 RGPD8O14715 1765 aaPredicted RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 C16orf96A6NNT2 1141 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 EIF3HO15372 352 aaKnown RBP eCLIP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 PMPCBO75439 489 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 AP1G2O75843 785 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 PGK2P07205 417 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 MDH1P40925 334 aaKnown RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 NBPF20Q3BBV1 942 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 SETD3Q86TU7 594 aaPredicted RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 VPS37AQ8NEZ2 397 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 FEZF2Q8TBJ5 459 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 ENTPD7Q9NQZ7 604 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 SEC24DO94855 1032 aaPredicted RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 FDFT1P37268 417 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 SERPINB8P50452 374 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 POLD3Q15054 466 aaPredicted RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 CST8O60676 142 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 SLC11A2P49281 568 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms