RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 CCDC6Q16204 474 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 ZSWIM2Q8NEG5 633 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 ZC3H10Q96K80 434 aaKnown RBP24.38■■□□□ 1.49
VLDLR-201ENST00000382096 FAM213AQ9BRX8 229 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 FGFBP2Q9BYJ0 223 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 PANK2Q9BZ23 570 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 EBF3Q9H4W6 596 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 TDP1Q9NUW8 608 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 PANK4Q9NVE7 773 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 ABI2Q9NYB9 513 aaPredicted RBP24.38■■□□□ 1.49
VLDLR-201ENST00000382096 PCDHGA5Q9Y5G8 931 aa24.38■■□□□ 1.49
VLDLR-201ENST00000382096 KPNA7A9QM74 516 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 CCDC192P0DO97 292 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 IDEP14735 1019 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 KCNA4P22459 653 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 PNPLA4P41247 253 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 SHC2P98077 582 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 SV2CQ496J9 727 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 WSCD1Q658N2 575 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 TRIM68Q6AZZ1 485 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 CAMKK1Q8N5S9 505 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 MAB21L3Q8N8X9 362 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 ZNF560Q96MR9 790 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 FOXD4L1Q9NU39 408 aa24.37■■□□□ 1.49
VLDLR-201ENST00000382096 PPP6R2O75170 966 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 AMPD2Q01433 879 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 BFSP1Q12934 665 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 E2F4Q16254 413 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 N4BP2L1Q5TBK1 243 aaPredicted RBP24.36■■□□□ 1.49
VLDLR-201ENST00000382096 STPG1Q5TH74 334 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 DCP1BQ8IZD4 617 aaKnown RBP24.36■■□□□ 1.49
VLDLR-201ENST00000382096 CXorf38Q8TB03 319 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 RIN3Q8TB24 985 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 SNX21Q969T3 373 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 SAAL1Q96ER3 474 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 TNMDQ9H2S6 317 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 TMEM206Q9H813 350 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 PCDHB5Q9Y5E4 795 aa24.36■■□□□ 1.49
VLDLR-201ENST00000382096 RNF40O75150 1001 aa24.35■■□□□ 1.49
VLDLR-201ENST00000382096 EGFP01133 1207 aa24.35■■□□□ 1.49
VLDLR-201ENST00000382096 ZNF268Q14587 947 aaPredicted RBP24.35■■□□□ 1.49
VLDLR-201ENST00000382096 STK38Q15208 465 aa24.35■■□□□ 1.49
VLDLR-201ENST00000382096 SYCP3Q8IZU3 236 aa24.35■■□□□ 1.49
VLDLR-201ENST00000382096 C1orf127Q8N9H9 656 aa24.35■■□□□ 1.49
VLDLR-201ENST00000382096 CBWD1Q9BRT8 395 aa24.35■■□□□ 1.49
VLDLR-201ENST00000382096 KBTBD4Q9NVX7 518 aa24.35■■□□□ 1.49
VLDLR-201ENST00000382096 RBAKQ9NYW8 714 aaPredicted RBP24.35■■□□□ 1.49
VLDLR-201ENST00000382096 SPTLC2O15270 562 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 ARSAP15289 507 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 DRD1P21728 446 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 MPLP40238 635 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 TFAMQ00059 246 aaKnown RBP24.34■■□□□ 1.49
VLDLR-201ENST00000382096 TXNDC8Q6A555 127 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 MON1AQ86VX9 555 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 CCDC65Q8IXS2 484 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 LRRC52Q8N7C0 313 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 PDILTQ8N807 584 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 CACTINQ8WUQ7 758 aaKnown RBP24.34■■□□□ 1.49
VLDLR-201ENST00000382096 CUEDC2Q9H467 287 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 FBRSL1Q9HCM7 1045 aaKnown RBP24.34■■□□□ 1.49
VLDLR-201ENST00000382096 TMLHEQ9NVH6 421 aa24.34■■□□□ 1.49
VLDLR-201ENST00000382096 KIAA0391O15091 583 aaKnown RBP24.33■■□□□ 1.49
VLDLR-201ENST00000382096 PRPF6O94906 941 aaKnown RBP24.33■■□□□ 1.49
VLDLR-201ENST00000382096 YEATS4O95619 227 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 CSH1P0DML2 217 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 CSH2P0DML3 217 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 POLR2BP30876 1174 aaKnown RBP24.33■■□□□ 1.49
VLDLR-201ENST00000382096 PDGFRLQ15198 375 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 PLK5Q496M5 336 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 FBXO43Q4G163 708 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 CC2D1AQ6P1N0 951 aaPredicted RBP24.33■■□□□ 1.49
VLDLR-201ENST00000382096 CNNM4Q6P4Q7 775 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 LEO1Q8WVC0 666 aaPredicted RBP24.33■■□□□ 1.49
VLDLR-201ENST00000382096 MRPS31Q92665 395 aaKnown RBP24.33■■□□□ 1.49
VLDLR-201ENST00000382096 ZNF396Q96N95 335 aaPredicted RBP24.33■■□□□ 1.49
VLDLR-201ENST00000382096 LRRC27Q9C0I9 530 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 VPS45Q9NRW7 570 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 ITGA11Q9UKX5 1188 aa24.33■■□□□ 1.49
VLDLR-201ENST00000382096 ITGB3P05106 788 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 GALK1P51570 392 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 TSPY1Q01534 308 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 NFE2Q16621 373 aaPredicted RBP24.32■■□□□ 1.48
VLDLR-201ENST00000382096 PDCL2Q8N4E4 241 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 P2RY13Q9BPV8 354 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 LSM14BQ9BX40 385 aaKnown RBP24.32■■□□□ 1.48
VLDLR-201ENST00000382096 TRIM9Q9C026 710 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 SMOC1Q9H4F8 434 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 POLR3BQ9NW08 1133 aaPredicted RBP24.32■■□□□ 1.48
VLDLR-201ENST00000382096 GDAP2Q9NXN4 497 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 AGAP1Q9UPQ3 857 aa24.32■■□□□ 1.48
VLDLR-201ENST00000382096 PTPRDP23468 1912 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 THADAQ6YHU6 1953 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 GOLGA8IPA6NC78 632 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 GOLGA8JA6NMD2 632 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 TADA3O75528 432 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 GJA4P35212 333 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 GPR15P49685 360 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 STXBP4Q6ZWJ1 553 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 SYT13Q7L8C5 426 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 GPD1LQ8N335 351 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms