RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 FKBP9P1Q75LS8 142 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 SFMBT1Q9UHJ3 866 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 VPS9D1Q9Y2B5 631 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 DUSP10Q9Y6W6 482 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 UBE2Q2LH0YL09 131 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 KIF1CO43896 1103 aaKnown RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 GIT2Q14161 759 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 CCDC85BQ15834 202 aaPredicted RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 YAF2Q8IY57 180 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ZNF556Q9HAH1 456 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 EFCAB14O75071 495 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 COPAP53621 1224 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 CORO7P57737 925 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 DDX53Q86TM3 631 aaKnown RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ACTRT1Q8TDG2 376 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ATP8B4Q8TF62 1192 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ACSF2Q96CM8 615 aaPredicted RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 FAM111AQ96PZ2 611 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 GPR63Q9BZJ6 419 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ZNF518BQ9C0D4 1074 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 PRDM5Q9NQX1 630 aaPredicted RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 WHRNQ9P202 907 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 PRRG1O14668 218 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 CAND2O75155 1236 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 TCN1P20061 433 aaPredicted RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 NAMPTP43490 491 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 LRRC74AQ0VAA2 488 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 CD302Q8IX05 232 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ILKAPQ9H0C8 392 aaPredicted RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 SEMA6BQ9H3T3 888 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 DDIT4Q9NX09 232 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 DPP3Q9NY33 737 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ITM2BQ9Y287 266 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 RPS6KL1Q9Y6S9 549 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 TRPC1P48995 793 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 CASP4P49662 377 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 STX5Q13190 355 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 CDKAL1Q5VV42 579 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 PRAMEF18Q5VWM3 479 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 CDR2LQ86X02 465 aaPredicted RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 SUGP1Q8IWZ8 645 aaKnown RBP16.68■□□□□ 0.26
COL2A1-202ENST00000380518 CYGBQ8WWM9 190 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ATG4AQ8WYN0 398 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 NAT9Q9BTE0 207 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 ZNF229Q9UJW7 825 aa16.68■□□□□ 0.26
COL2A1-202ENST00000380518 GLRA3O75311 464 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 SLC2A3P11169 496 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 VDRP11473 427 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 TGM2P21980 687 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 HARS2P49590 506 aaKnown RBP16.67■□□□□ 0.26
COL2A1-202ENST00000380518 MRPS35P82673 323 aaKnown RBP16.67■□□□□ 0.26
COL2A1-202ENST00000380518 TFDP3Q5H9I0 405 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 GALNT4Q8N4A0 578 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 LACRTQ9GZZ8 138 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 GPRC5CQ9NQ84 441 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 L1RE1Q9UN81 338 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 PTPRMP28827 1452 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 RHOBTB1O94844 696 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 CHRM3P20309 590 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 TMEM154Q6P9G4 183 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 BTNL9Q6UXG8 535 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 ADCK2Q7Z695 626 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 SAMD3Q8N6K7 520 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 VPS37AQ8NEZ2 397 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 MYCBPAPQ8TBZ2 947 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 CBWD1Q9BRT8 395 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 M0QYT0 321 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 KLRK1P26718 216 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 NPTX2P47972 431 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 CPA2P48052 419 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 ATXN3P54252 364 aaPredicted RBP16.67■□□□□ 0.26
COL2A1-202ENST00000380518 PDK2Q15119 407 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 OTULINQ96BN8 352 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 WNK4Q96J92 1243 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 RBBP8Q99708 897 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 A0A0A6YYK5 440 aaPredicted RBP16.67■□□□□ 0.26
COL2A1-202ENST00000380518 MYO1GB0I1T2 1018 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 OCM2P0CE71 109 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 OCMP0CE72 109 aaPredicted RBP16.67■□□□□ 0.26
COL2A1-202ENST00000380518 H2AFXP16104 143 aaPredicted RBP16.67■□□□□ 0.26
COL2A1-202ENST00000380518 OR1G1P47890 313 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 MCL1Q07820 350 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 SEC23AQ15436 765 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 FAXCQ5TGI0 409 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 PHTF1Q9UMS5 762 aa16.67■□□□□ 0.26
COL2A1-202ENST00000380518 KBTBD13C9JR72 458 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 DAB1O75553 588 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 SOAT2O75908 522 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 CAP2P40123 477 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 SKOR1P84550 965 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 TJAP1Q5JTD0 557 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 ADCK1Q86TW2 530 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 INO80Q9ULG1 1556 aaPredicted RBP16.66■□□□□ 0.26
COL2A1-202ENST00000380518 SERPIND1P05546 499 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 GEMP55040 296 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 KBTBD12Q3ZCT8 623 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 ACER1Q8TDN7 264 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms