RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 PSMC3P17980 439 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 BDNFP23560 247 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 PRCPP42785 496 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 GCLMP48507 274 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 CDH8P55286 799 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 UBXN2BQ14CS0 331 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 SLC44A4Q53GD3 710 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 ZNF658Q5TYW1 1059 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 VITQ6UXI7 678 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 TPRG1Q6ZUI0 275 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 ARID3BQ8IVW6 561 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 TTC16Q8NEE8 873 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 FUBP3Q96I24 572 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 TIGD1Q96MW7 591 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 GSDMAQ96QA5 445 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 PKMYT1Q99640 499 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 IMPG2Q9BZV3 1241 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 FOXQ1Q9C009 403 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 SMG9Q9H0W8 520 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 XYLT2Q9H1B5 865 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 ZDBF2Q9HCK1 2354 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 SLC38A8A6NNN8 435 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 H0Y858 1186 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 ZNF263O14978 683 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 GALR2O43603 387 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 VNN1O95497 513 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 STAU1O95793 577 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 HLA-DRAP01903 254 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 DCNP07585 359 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 CLDN10P78369 228 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 NHLH1Q02575 133 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 STIM1Q13586 685 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 NFIL3Q16649 462 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 SGSM1Q2NKQ1 1148 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 ZACNQ401N2 412 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 CFAP221Q4G0U5 840 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 DCAF17Q5H9S7 520 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 FAM171BQ6P995 826 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 LIMS2Q7Z4I7 341 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 MAB21L3Q8N8X9 362 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 B3GALNT2Q8NCR0 500 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 CCDC150Q8NCX0 1101 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 MYCBPAPQ8TBZ2 947 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 TMEM174Q8WUU8 243 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 DEPDC1BQ8WUY9 529 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 PCED1BQ96HM7 432 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 TASP1Q9H6P5 420 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 TRPC7Q9HCX4 862 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 HEBP1Q9NRV9 189 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 FAM86C1Q9NVL1 165 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 CHMP5Q9NZZ3 219 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 UXTQ9UBK9 157 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 SIT1Q9Y3P8 196 aa12.35□□□□□ -0.43
SMARCE1-203ENST00000377808 ZNF318Q5VUA4 2279 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 CLDN5O00501 218 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 IKBKBO14920 756 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 TRIM66O15016 1216 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 MAPK13O15264 365 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 HMGA1P17096 107 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 PTPN1P18031 435 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 CD72P21854 359 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 AVPR1AP37288 418 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 NLRP12P59046 1061 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 PRKCQQ04759 706 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 TCF15Q12870 199 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 IFRD2Q12894 506 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 ORC1Q13415 861 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 EDRF1Q3B7T1 1238 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 ZCWPW2Q504Y3 356 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 TCERG1LQ5VWI1 586 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 TXNDC8Q6A555 127 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 KLHL10Q6JEL2 608 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 MFSD6LQ8IWD5 586 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 CSGALNACT1Q8TDX6 532 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 IRF7Q92985 503 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 E2F7Q96AV8 911 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 VRTNQ9H8Y1 702 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 MAN1B1Q9UKM7 699 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 NME7Q9Y5B8 376 aa12.34□□□□□ -0.43
SMARCE1-203ENST00000377808 NCANO14594 1321 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 COL4A3Q01955 1670 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 KANSL1LA0AUZ9 987 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 TRIM49BA6NDI0 452 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 BIN1O00499 593 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 PSMA7O14818 248 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 NOL4O94818 638 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 PRAMEF12O95522 483 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 DDX6P26196 483 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 MAGEA11P43364 429 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 NUBP1P53384 320 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 STARD6P59095 220 aa12.33□□□□□ -0.44
SMARCE1-203ENST00000377808 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms