RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 CEP350Q5VT06 3117 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 MOXD2PA6NHM9 499 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 SIGLEC16A6NMB1 481 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 TULP2O00295 520 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 PSTPIP1O43586 416 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 PFKMP08237 780 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 PSMA2P25787 234 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 ADORA2BP29275 332 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 MAN1A1P33908 653 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 DR1Q01658 176 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 FAM102AQ5T9C2 384 aaPredicted RBP13.64□□□□□ -0.23
TRIM40-206ENST00000376724 AGMOQ6ZNB7 445 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 UNC93AQ86WB7 457 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 TTC30AQ86WT1 665 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 ADGRF2Q8IZF7 708 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 IPO4Q8TEX9 1081 aaKnown RBP13.64□□□□□ -0.23
TRIM40-206ENST00000376724 ADAM2Q99965 735 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 TRIM51Q9BSJ1 452 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 HEMGNQ9BXL5 484 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 TRIM31Q9BZY9 425 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
TRIM40-206ENST00000376724 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 WDR35Q9P2L0 1181 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 A0A1W2PQ45 241 aaPredicted RBP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 A0A1W2PQY0 241 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 E5RJQ4 531 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 CYB561D2O14569 222 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 PHF2O75151 1096 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 RARAP10276 462 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 CCDC130P13994 396 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 HSPA6P17066 643 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 TNFRSF8P28908 595 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 EPHB4P54760 987 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 PIGHQ14442 188 aaPredicted RBP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 HLTFQ14527 1009 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 ZNF268Q14587 947 aaPredicted RBP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 STILQ15468 1287 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 TRIM71Q2Q1W2 868 aaKnown RBP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 OR6B2Q6IFH4 312 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 SH3TC2Q8TF17 1288 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 RNF25Q96BH1 459 aaPredicted RBP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 ACSF2Q96CM8 615 aaPredicted RBP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 SLC38A7Q9NVC3 462 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 UTP11Q9Y3A2 253 aaKnown RBP13.63□□□□□ -0.23
TRIM40-206ENST00000376724 PTCH2Q9Y6C5 1203 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 CASTOR2A6NHX0 329 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 PI4K2BG5E9Z4 385 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 RALAP11233 206 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 LRPAP1P30533 357 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 GABRB2P47870 512 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 CLCNKBP51801 687 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 ARHGEF6Q15052 776 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 PMF1Q6P1K2 205 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 C1orf54Q8WWF1 131 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 HERPUD2Q9BSE4 406 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 GIT1Q9Y2X7 761 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 TRIM17Q9Y577 477 aa13.63□□□□□ -0.23
TRIM40-206ENST00000376724 FSCN2O14926 492 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 DAPK3O43293 454 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 GRAP2O75791 330 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 POMCP01189 267 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 FAM153BP0C7A2 387 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 CKBP12277 381 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 ACAT1P24752 427 aaKnown RBP13.62□□□□□ -0.23
TRIM40-206ENST00000376724 CHRNA3P32297 505 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 SNX1Q13596 522 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 SIX1Q15475 284 aaPredicted RBP13.62□□□□□ -0.23
TRIM40-206ENST00000376724 PPP2R5EQ16537 467 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 FAM153CQ494X1 144 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 ODF2Q5BJF6 829 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 WSCD1Q658N2 575 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 TXNRD3NBQ6F5E7 133 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 TTC27Q6P3X3 843 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 CCDC137Q6PK04 289 aaKnown RBP13.62□□□□□ -0.23
TRIM40-206ENST00000376724 FAM183BPQ6ZVS7 135 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 CCDC105Q8IYK2 499 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 KATNAL2Q8IYT4 538 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 MCRS1Q96EZ8 462 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 PIWIL1Q96J94 861 aaKnown RBP13.62□□□□□ -0.23
TRIM40-206ENST00000376724 FAM153AQ9UHL3 310 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 INPP5FQ9Y2H2 1132 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
TRIM40-206ENST00000376724 PODXLO00592 558 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 ATP2C2O75185 946 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 KRT1P04264 644 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 YY1P25490 414 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 KCNJ1P48048 391 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 KAZNQ674X7 775 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 ANKS1BQ7Z6G8 1248 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
TRIM40-206ENST00000376724 OSTM1Q86WC4 334 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 SCUBE3Q8IX30 993 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 PAAF1Q9BRP4 392 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 TSEN34Q9BSV6 310 aaKnown RBP13.61□□□□□ -0.23
TRIM40-206ENST00000376724 ZWILCHQ9H900 591 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms