RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 CYP1A2P05177 515 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 TNNT1P13805 278 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 PTPN1P18031 435 aaKnown RBP11.08□□□□□ -0.64
PDPN-203ENST00000376061 MMP8P22894 467 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 PCSK1P29120 753 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 PTP4A2Q12974 167 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 MDH1BQ5I0G3 518 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 MMS22LQ6ZRQ5 1243 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 TTC30AQ86WT1 665 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 MCOLN2Q8IZK6 566 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 OR10T2Q8NGX3 314 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 SLC2A14Q8TDB8 520 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 TRIM11Q96F44 468 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 WDR24Q96S15 920 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 PKMYT1Q99640 499 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 C11orf70Q9BRQ4 267 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 ZNF518BQ9C0D4 1074 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 MYO1AQ9UBC5 1043 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 GTF3C4Q9UKN8 822 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 CDH9Q9ULB4 789 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 MRPL42Q9Y6G3 142 aaKnown RBP11.08□□□□□ -0.64
PDPN-203ENST00000376061 NT5C1B-RDH14C9J2C7 533 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 SYN3O14994 580 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 BUB1O43683 1085 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 GJB5O95377 273 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 MYBL1P10243 752 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 FGFR3P22607 806 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 ADORA2BP29275 332 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 GPD2P43304 727 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 BCAT1P54687 386 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 GPC5P78333 572 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 YWHAHQ04917 246 aaPredicted RBP11.07□□□□□ -0.64
PDPN-203ENST00000376061 PDCLQ13371 301 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 BTG3Q14201 252 aaPredicted RBP11.07□□□□□ -0.64
PDPN-203ENST00000376061 TCEAL1Q15170 157 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 PTPN20Q4JDL3 420 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 C2CD6Q53TS8 623 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 INTS6LQ5JSJ4 861 aaKnown RBP11.07□□□□□ -0.64
PDPN-203ENST00000376061 ZNF569Q5MCW4 686 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 LLGL2Q6P1M3 1020 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 FUT10Q6P4F1 479 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 SYT10Q6XYQ8 523 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 FUKQ8N0W3 1084 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 SLC35F6Q8N357 371 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 RNF10Q8N5U6 811 aaKnown RBP11.07□□□□□ -0.64
PDPN-203ENST00000376061 UBA3Q8TBC4 463 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 HERVK_113Q902F9 699 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 ZNF558Q96NG5 402 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 NOX5Q96PH1 765 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 HS3ST6Q96QI5 342 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 CPXM1Q96SM3 734 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 YME1L1Q96TA2 773 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 HNRNPABQ99729 332 aaKnown RBP11.07□□□□□ -0.64
PDPN-203ENST00000376061 LBHD1Q9BQE6 289 aaPredicted RBP11.07□□□□□ -0.64
PDPN-203ENST00000376061 ACBD6Q9BR61 282 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 GPR62Q9BZJ7 368 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 OSGEPQ9NPF4 335 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 AVENQ9NQS1 362 aaPredicted RBP11.07□□□□□ -0.64
PDPN-203ENST00000376061 ADAM22Q9P0K1 906 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 HESX1Q9UBX0 185 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 CNOT8Q9UFF9 292 aaKnown RBP11.07□□□□□ -0.64
PDPN-203ENST00000376061 COG5Q9UP83 839 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 PCDHGC5Q9Y5F6 944 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 PLXNA4Q9HCM2 1894 aa11.07□□□□□ -0.64
PDPN-203ENST00000376061 MYBPHLA2RUH7 354 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 GRID2IPA4D2P6 1211 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 CCDC85CA6NKD9 419 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 TULP2O00295 520 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 CLDN5O00501 218 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 MTA2O94776 668 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 OAZ2O95190 189 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 EFEMP2O95967 443 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 CALB1P05937 261 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 SETSIPP0DME0 302 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 LAG3P18627 525 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 RRM1P23921 792 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 ALDH7A1P49419 539 aaKnown RBP11.06□□□□□ -0.64
PDPN-203ENST00000376061 HADHBP55084 474 aaKnown RBP11.06□□□□□ -0.64
PDPN-203ENST00000376061 HTRA4P83105 476 aaPredicted RBP11.06□□□□□ -0.64
PDPN-203ENST00000376061 PDE4CQ08493 712 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 ELAVL2Q12926 359 aaKnown RBP11.06□□□□□ -0.64
PDPN-203ENST00000376061 VARS2Q5ST30 1063 aaKnown RBP11.06□□□□□ -0.64
PDPN-203ENST00000376061 FAM171A1Q5VUB5 890 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 KCNT2Q6UVM3 1135 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.06□□□□□ -0.64
PDPN-203ENST00000376061 PAQR9Q6ZVX9 377 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 FAM35AQ86V20 835 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 ERICH1Q86X53 443 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 RHOT2Q8IXI1 618 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 SLC39A11Q8N1S5 342 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 COLGALT1Q8NBJ5 622 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 SLC35G2Q8TBE7 412 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 MYCBPAPQ8TBZ2 947 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 DPF3Q92784 378 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 MYLPFQ96A32 169 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 VCPIP1Q96JH7 1222 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 B3GALT6Q96L58 329 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 ALS2CR12Q96Q35 445 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms