RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 SGPL1O95470 568 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TCF7P36402 384 aaPredicted RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 GSSP48637 474 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 GNASQ5JWF2 1037 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 CCNI2Q6ZMN8 369 aaPredicted RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 SAMD7Q7Z3H4 446 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TAAR1Q96RJ0 339 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 IARS2Q9NSE4 1012 aaKnown RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 DDIT4Q9NX09 232 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 ZNF70Q9UC06 446 aaPredicted RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 CYP7B1O75881 506 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 GSTM1P09488 218 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 PRKCQQ04759 706 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 CYP51A1Q16850 503 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 POP1Q99575 1024 aaKnown RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 ROGDIQ9GZN7 287 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 MAN1C1Q9NR34 630 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TBC1D23Q9NUY8 699 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 IMPAD1Q9NX62 359 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 NSMCE4AQ9NXX6 385 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TRMT6Q9UJA5 497 aaKnown RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 ALBP02768 609 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 ZNF23P17027 643 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 GPC1P35052 558 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 TP53BP2Q13625 1128 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 RPRD1AQ96P16 312 aaPredicted RBP14.23□□□□□ -0.13
COL4A1-201ENST00000375820 KRT75O95678 551 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 ASS1P00966 412 aaKnown RBP14.23□□□□□ -0.13
COL4A1-201ENST00000375820 CD4P01730 458 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 HSMCR30P0CW71 290 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 LAMC2Q13753 1193 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 FEZF2Q8TBJ5 459 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 MOV10L1Q9BXT6 1211 aaKnown RBP14.23□□□□□ -0.13
COL4A1-201ENST00000375820 CDC42BPGQ6DT37 1551 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 STRNO43815 780 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 KLHL2O95198 593 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 VTNP04004 478 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 ATG9AQ7Z3C6 839 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 KRT78Q8N1N4 520 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 NOA1Q8NC60 698 aaKnown RBP14.23□□□□□ -0.13
COL4A1-201ENST00000375820 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 KATNAL1Q9BW62 490 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 PIH1D1Q9NWS0 290 aaKnown RBP14.23□□□□□ -0.13
COL4A1-201ENST00000375820 HAO1Q9UJM8 370 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 TOMM70O94826 608 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 FAM200BP0CF97 657 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 PYGMP11217 842 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 KLRC1P26715 233 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 TDRD10Q5VZ19 366 aaKnown RBP14.23□□□□□ -0.13
COL4A1-201ENST00000375820 ACOT1Q86TX2 421 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 CACUL1Q86Y37 369 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 AGGF1Q8N302 714 aaeCLIP14.23□□□□□ -0.13
COL4A1-201ENST00000375820 C7orf25Q9BPX7 421 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 DPP3Q9NY33 737 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 WDR19Q8NEZ3 1342 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 VWA5AO00534 786 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 FEN1P39748 380 aaKnown RBP14.23□□□□□ -0.13
COL4A1-201ENST00000375820 PDIA5Q14554 519 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 KCNV1Q6PIU1 500 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 GLMNQ92990 594 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 CEP41Q9BYV8 373 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 GRID1Q9ULK0 1009 aa14.23□□□□□ -0.13
COL4A1-201ENST00000375820 CSDE1O75534 798 aaKnown RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ALDH1A2O94788 518 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ABCB1P08183 1280 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 GEMIN4P57678 1058 aaKnown RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 SNAPC2Q13487 334 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 HDDC2Q7Z4H3 204 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 OOSP2Q86WS3 158 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 KRT84Q9NSB2 600 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 WDR35Q9P2L0 1181 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 STX7O15400 261 aaKnown RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ZNF682O95780 498 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 TAL1P17542 331 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ACO1P21399 889 aaKnown RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 COILP38432 576 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 NR1I3Q14994 352 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 UXS1Q8NBZ7 420 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 NSL1Q96IY1 281 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 SCUBE2Q9NQ36 999 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 MTO1Q9Y2Z2 717 aaKnown RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 N6AMT1Q9Y5N5 214 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 EXTL3O43909 919 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 TFRCP02786 760 aaKnown RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ZCCHC18P0CG32 403 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 PDHBP11177 359 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 DNAJB2P25686 324 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 FNTAP49354 379 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 SEMA4DQ92854 862 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 MTMR12Q9C0I1 747 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 OSGEPL1Q9H4B0 414 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 RIC8BQ9NVN3 520 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ZNF609O15014 1411 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 NR5A2O00482 541 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ORC2Q13416 577 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 HIST2H2ACQ16777 129 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 HIST2H2AA3Q6FI13 130 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 CENPLQ8N0S6 344 aaPredicted RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 FLCNQ8NFG4 579 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms