RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 FBXO40Q9UH90 709 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 LNPEPQ9UIQ6 1025 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 GRID1Q9ULK0 1009 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 FZD1Q9UP38 647 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 PPP2R3BQ9Y5P8 575 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 E7ESA3 106 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 TROVE2P10155 538 aaKnown RBP eCLIP18.85■□□□□ 0.61
PHF1-201ENST00000374512 POLR2BP30876 1174 aaKnown RBP18.85■□□□□ 0.61
PHF1-201ENST00000374512 SURF1Q15526 300 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 LVRNQ6Q4G3 990 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 THNSL1Q8IYQ7 743 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 DNERQ8NFT8 737 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 TRPM4Q8TD43 1214 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 FNIP1Q8TF40 1166 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 TMEM121Q9BTD3 319 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 KIF9Q9HAQ2 790 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 RNPEPL1Q9HAU8 725 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 ANKFY1Q9P2R3 1169 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 LOC285556D6RIA3 1793 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 SPDYE16A6NNV3 312 aaPredicted RBP18.85■□□□□ 0.61
PHF1-201ENST00000374512 KRT4P19013 534 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 CALB2P22676 271 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 GPX6P59796 221 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 SEPT7Q16181 437 aaKnown RBP18.85■□□□□ 0.61
PHF1-201ENST00000374512 TAZQ16635 292 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 SGSM1Q2NKQ1 1148 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 ANKRD20A2Q5SQ80 823 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 ANKRD20A1Q5TYW2 823 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 ANKRD20A3Q5VUR7 823 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 ZNF526Q8TF50 670 aaPredicted RBP18.85■□□□□ 0.61
PHF1-201ENST00000374512 ZNF570Q96NI8 536 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 SGIP1Q9BQI5 828 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 MAK16Q9BXY0 300 aaKnown RBP18.85■□□□□ 0.61
PHF1-201ENST00000374512 NIF3L1Q9GZT8 377 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 TLE6Q9H808 572 aa18.85■□□□□ 0.61
PHF1-201ENST00000374512 C3orf70A6NLC5 250 aaPredicted RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 SSTR3P32745 418 aaPredicted RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 OGDHQ02218 1023 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 HADHQ16836 314 aaKnown RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 NOL9Q5SY16 702 aaKnown RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 BBS12Q6ZW61 710 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 BZW1Q7L1Q6 419 aaKnown RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 OTOAQ7RTW8 1153 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 NAT8LQ8N9F0 302 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 SPOCK2Q92563 424 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 SLC7A6OSQ96CW6 309 aaPredicted RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 GPRC5DQ9NZD1 345 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 HAO1Q9UJM8 370 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 CLUHO75153 1309 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 A0A1W2PPM1 405 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 IFNB1P01574 187 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 T-ENOLP0DO92 83 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 TARSP26639 723 aaKnown RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 CTCFP49711 727 aaPredicted RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 YWHAEP62258 255 aaKnown RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 CMPK2Q5EBM0 449 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 ZBTB41Q5SVQ8 909 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 ENDOVQ8N8Q3 282 aaKnown RBP18.84■□□□□ 0.61
PHF1-201ENST00000374512 CHST13Q8NET6 341 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 CISHQ9NSE2 258 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 GGA3Q9NZ52 723 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 AGTPBP1Q9UPW5 1226 aa18.84■□□□□ 0.61
PHF1-201ENST00000374512 HGSO14964 777 aaPredicted RBP18.83■□□□□ 0.6
PHF1-201ENST00000374512 ADCY3O60266 1144 aa18.83■□□□□ 0.6
PHF1-201ENST00000374512 LMNAP02545 664 aaKnown RBP18.83■□□□□ 0.6
PHF1-201ENST00000374512 PTPN4P29074 926 aa18.83■□□□□ 0.6
PHF1-201ENST00000374512 EFNA5P52803 228 aa18.83■□□□□ 0.6
PHF1-201ENST00000374512 GPAT2Q6NUI2 795 aa18.83■□□□□ 0.6
PHF1-201ENST00000374512 STK32AQ8WU08 396 aa18.83■□□□□ 0.6
PHF1-201ENST00000374512 CPT1BQ92523 772 aa18.83■□□□□ 0.6
PHF1-201ENST00000374512 TBC1D10AQ9BXI6 508 aa18.83■□□□□ 0.6
PHF1-201ENST00000374512 LRRC42Q9Y546 428 aa18.83■□□□□ 0.6
PHF1-201ENST00000374512 IGKV6D-21A0A0A0MT36 114 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 SIGLEC16A6NMB1 481 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 GNAZP19086 355 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 HP1BP3Q5SSJ5 553 aaPredicted RBP18.82■□□□□ 0.6
PHF1-201ENST00000374512 NLRP9Q7RTR0 991 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 TEX9Q8N6V9 391 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 LHX5Q9H2C1 402 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 ZFP69BQ9UJL9 534 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 AFG3L2Q9Y4W6 797 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 PPME1Q9Y570 386 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 POLR2AP24928 1970 aaKnown RBP18.82■□□□□ 0.6
PHF1-201ENST00000374512 CST3P01034 146 aaPredicted RBP18.82■□□□□ 0.6
PHF1-201ENST00000374512 DUOXA2Q1HG44 320 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 WDR78Q5VTH9 848 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 TXNRD3NBQ6F5E7 133 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 C3orf62Q6ZUJ4 267 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 PDIK1LQ8N165 341 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 WDTC1Q8N5D0 677 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 BANPQ8N9N5 519 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 FAM13CQ8NE31 585 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 ACTL9Q8TC94 416 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 MZB1Q8WU39 189 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 RSAD2Q8WXG1 361 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 PAFAH2Q99487 392 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 WDR35Q9P2L0 1181 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 SSC5DA1L4H1 1573 aa18.82■□□□□ 0.6
PHF1-201ENST00000374512 TOM1L1O75674 476 aa18.81■□□□□ 0.6
PHF1-201ENST00000374512 BRD2P25440 801 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms