RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RUSC1Q9BVN2 902 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 KCNK4Q9NYG8 393 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 UVRAGQ9P2Y5 699 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 ZNHIT2Q9UHR6 403 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 CASQ2O14958 399 aaPredicted RBP13.52□□□□□ -0.24
PRPF4-201ENST00000374198 TRIM49P0CI25 452 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 TRIM49CP0CI26 452 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 CDH2P19022 906 aaPredicted RBP13.52□□□□□ -0.24
PRPF4-201ENST00000374198 VCPP55072 806 aaKnown RBP13.52□□□□□ -0.24
PRPF4-201ENST00000374198 IRX4P78413 519 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 MYL7Q01449 175 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 CCNG2Q16589 344 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 ISLR2Q6UXK2 745 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 PACS1Q6VY07 963 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 PRPF39Q86UA1 669 aaKnown RBP13.52□□□□□ -0.24
PRPF4-201ENST00000374198 ZNF444Q8N0Y2 327 aaPredicted RBP13.52□□□□□ -0.24
PRPF4-201ENST00000374198 TTLL6Q8N841 843 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 ALKBH8Q96BT7 664 aaKnown RBP13.52□□□□□ -0.24
PRPF4-201ENST00000374198 FAM118BQ9BPY3 351 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 MKNK1Q9BUB5 465 aa13.52□□□□□ -0.24
PRPF4-201ENST00000374198 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.24
PRPF4-201ENST00000374198 HBS1LQ9Y450 684 aaKnown RBP13.52□□□□□ -0.24
PRPF4-201ENST00000374198 ARHGAP42A6NI28 874 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 H3BSA7 217 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 hCG_1984214I3L0E3 225 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 SLC26A4O43511 780 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 DHRS4L1P0CG22 281 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 BGNP21810 368 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 CLCN2P51788 898 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 CCNIQ14094 377 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 MFSD4BQ5TF39 518 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 ERI1Q8IV48 349 aaKnown RBP13.52□□□□□ -0.25
PRPF4-201ENST00000374198 ZNF713Q8N859 430 aaPredicted RBP13.52□□□□□ -0.25
PRPF4-201ENST00000374198 ATP11CQ8NB49 1132 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 DEPTORQ8TB45 409 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 ETNPPLQ8TBG4 499 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 DDI1Q8WTU0 396 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 IKZF4Q9H2S9 585 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 ZNF696Q9H7X3 374 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 PLGRKTQ9HBL7 147 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.25
PRPF4-201ENST00000374198 GTF3C4Q9UKN8 822 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 CEPT1Q9Y6K0 416 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 MYO3BQ8WXR4 1341 aa13.52□□□□□ -0.25
PRPF4-201ENST00000374198 RSPH10B2B2RC85 870 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 ALOX15BO15296 676 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 TNFAIP8O95379 198 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 RSPH10BP0C881 870 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 COL6A2P12110 1019 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 CPOXP36551 454 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 CCR3P51677 355 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 NAA20P61599 178 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 BTKQ06187 659 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 SF3B3Q15393 1217 aaKnown RBP13.51□□□□□ -0.25
PRPF4-201ENST00000374198 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 HSF5Q4G112 596 aaPredicted RBP13.51□□□□□ -0.25
PRPF4-201ENST00000374198 CENPUQ71F23 418 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 AHI1Q8N157 1196 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 MZB1Q8WU39 189 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 VPS50Q96JG6 964 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 KLF6Q99612 283 aaPredicted RBP13.51□□□□□ -0.25
PRPF4-201ENST00000374198 HEMGNQ9BXL5 484 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 Q9H521 79 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 CAPN8A6NHC0 703 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
PRPF4-201ENST00000374198 E5RJQ4 531 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 DNAJA2O60884 412 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 PSMC6P62333 389 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 KLF1Q13351 362 aaPredicted RBP13.51□□□□□ -0.25
PRPF4-201ENST00000374198 TBCCQ15814 346 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 ANO5Q75V66 913 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 GIPC3Q8TF64 312 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 JADE3Q92613 823 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 CCDC106Q9BWC9 280 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 BCAS3Q9H6U6 928 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
PRPF4-201ENST00000374198 PCDHGB4Q9UN71 923 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 SOX13Q9UN79 622 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 DTNAQ9Y4J8 743 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 PCDHGB5Q9Y5G0 923 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 HEY1Q9Y5J3 304 aa13.51□□□□□ -0.25
PRPF4-201ENST00000374198 MATN2O00339 956 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 DNALI1O14645 258 aaPredicted RBP13.5□□□□□ -0.25
PRPF4-201ENST00000374198 CCNT2O60583 730 aaKnown RBP13.5□□□□□ -0.25
PRPF4-201ENST00000374198 CSDE1O75534 798 aaKnown RBP13.5□□□□□ -0.25
PRPF4-201ENST00000374198 STAT3P40763 770 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 NR1H2P55055 460 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 ZNF200P98182 395 aaPredicted RBP13.5□□□□□ -0.25
PRPF4-201ENST00000374198 APOFQ13790 326 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 UBE2SQ16763 222 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 MAP7D1Q3KQU3 841 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 ADGRD1Q6QNK2 874 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 INPP5FQ9Y2H2 1132 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 FADS3Q9Y5Q0 445 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 NR2E3Q9Y5X4 410 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms