RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ZNF75CPQ92670 426 aaPredicted RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 SLC7A6OSQ96CW6 309 aaPredicted RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 RSRC1Q96IZ7 334 aaKnown RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 XYLT2Q9H1B5 865 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 CYTH4Q9UIA0 394 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 SSC5DA1L4H1 1573 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 SIGLEC16A6NMB1 481 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 ZWINTO95229 277 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 SSTR1P30872 391 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 GBP2P32456 591 aaPredicted RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 PTPN20Q4JDL3 420 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 LVRNQ6Q4G3 990 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 DNERQ8NFT8 737 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 ACSS3Q9H6R3 686 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 CPSF3Q9UKF6 684 aaKnown RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 STRIP2Q9ULQ0 834 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 SRCAPQ6ZRS2 3230 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 WEE2P0C1S8 567 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 ATP11AP98196 1134 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 DUOXA2Q1HG44 320 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 CDCA2Q69YH5 1023 aaPredicted RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 DENND1BQ6P3S1 775 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 JOSD2Q8TAC2 188 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 FNIP1Q8TF40 1166 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 MIEF2Q96C03 454 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 ZNF570Q96NI8 536 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 ACO2Q99798 780 aaKnown RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 C10orf88Q9H8K7 445 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 TJP2Q9UDY2 1190 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 C19orf81C9J6K1 198 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 TRAFD1O14545 582 aaPredicted RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 FARP2O94887 1054 aaPredicted RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 HOXC6P09630 235 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 KDELR1P24390 212 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 RPL22P35268 128 aaKnown RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 CRYMQ14894 314 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 ZBTB33Q86T24 672 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 VSIG1Q86XK7 387 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 ATP11CQ8NB49 1132 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 PRPF31Q8WWY3 499 aaKnown RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 MRRFQ96E11 262 aaKnown RBP13.39□□□□□ -0.27
CTPS1-202ENST00000372621 ADAM33Q9BZ11 813 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 LHX5Q9H2C1 402 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 SLC5A4Q9NY91 659 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 HAO1Q9UJM8 370 aa13.39□□□□□ -0.27
CTPS1-202ENST00000372621 TCRBV7S3A2A0A539 114 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 SPDYE16A6NNV3 312 aaPredicted RBP13.38□□□□□ -0.27
CTPS1-202ENST00000372621 CST8O60676 142 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 DIAPH2O60879 1101 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 KRT7P08729 469 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 UBA1P22314 1058 aaKnown RBP13.38□□□□□ -0.27
CTPS1-202ENST00000372621 PSMA2P25787 234 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 PHBP35232 272 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 EFNA5P52803 228 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 ARL4CP56559 192 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 MAPK6Q16659 721 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 SMTNL2Q2TAL5 461 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 PLEKHG4Q58EX7 1191 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 HHATQ5VTY9 493 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 DCAF15Q66K64 600 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 TTC13Q8NBP0 860 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 DCAKDQ8WVC6 231 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 MRPL4Q9BYD3 311 aaKnown RBP13.38□□□□□ -0.27
CTPS1-202ENST00000372621 C2CD2LO14523 706 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 OGTO15294 1046 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 ALDH3A1P30838 453 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 CLNS1AP54105 237 aaKnown RBP13.38□□□□□ -0.27
CTPS1-202ENST00000372621 DYNLT1P63172 113 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 CNTN2Q02246 1040 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 KCNT1Q5JUK3 1230 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 C3orf62Q6ZUJ4 267 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 THNSL1Q8IYQ7 743 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 BANPQ8N9N5 519 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 WRNIP1Q96S55 665 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 PAFAH2Q99487 392 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 ZWILCHQ9H900 591 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 PICK1Q9NRD5 415 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 NUMBLQ9Y6R0 609 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
CTPS1-202ENST00000372621 TMEM63AO94886 807 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 CD48P09326 243 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 KRT3P12035 628 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
CTPS1-202ENST00000372621 RPS12P25398 132 aaKnown RBP13.37□□□□□ -0.27
CTPS1-202ENST00000372621 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 SLC45A4Q5BKX6 768 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 RHPN2Q8IUC4 686 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 ZNF398Q8TD17 642 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 CAMKK2Q96RR4 588 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 FZD1Q9UP38 647 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 CEP83Q9Y592 693 aa13.37□□□□□ -0.27
CTPS1-202ENST00000372621 PROZP22891 400 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms