RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 AGAP1Q9UPQ3 857 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 ADCY10Q96PN6 1610 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SHROOM1Q2M3G4 852 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 MFSD14CQ5VZR4 134 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 KCNV1Q6PIU1 500 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 FAM71DQ8N9W8 422 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 KLHL4Q9C0H6 718 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 ILKAPQ9H0C8 392 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SMARCAL1Q9NZC9 954 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 ZNF23P17027 643 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 PLEKHA7Q6IQ23 1121 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 LINC00523Q86TU6 105 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 PPIL6Q8IXY8 311 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 UXS1Q8NBZ7 420 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 OR6J1Q8NGC5 347 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 RSPH1Q8WYR4 309 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 CAPN10Q9HC96 672 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
HCFC1-202ENST00000369984 CACHD1Q5VU97 1274 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 TRAPPC11Q7Z392 1133 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 MIER2Q8N344 545 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 JADE3Q92613 823 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 PNMA8BQ9ULN7 279 aaPredicted RBP12.93□□□□□ -0.34
HCFC1-202ENST00000369984 F5H6K3 240 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 TBC1D12O60347 775 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 HSMCR30P0CW71 290 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 CHRM3P20309 590 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 KLRC3Q07444 240 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 HLFQ16534 295 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 EXD1Q8NHP7 514 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 RSAD1Q9HA92 442 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 RFX7Q2KHR2 1363 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 IQCA1LA6NCM1 817 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 JAMLQ86YT9 394 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 ERP44Q9BS26 406 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 STON1Q9Y6Q2 735 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 UGGT1Q9NYU2 1555 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 PCP4L1A6NKN8 68 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 MZF1P28698 734 aaPredicted RBP12.93□□□□□ -0.34
HCFC1-202ENST00000369984 AGAP9Q5VTM2 703 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 STX12Q86Y82 276 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 MB21D2Q8IYB1 491 aaPredicted RBP12.93□□□□□ -0.34
HCFC1-202ENST00000369984 MDM1Q8TC05 714 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 SERPINB12Q96P63 405 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 SNX9Q9Y5X1 595 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 MAP3K4Q9Y6R4 1608 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
HCFC1-202ENST00000369984 NUP107P57740 925 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 CNTN1Q12860 1018 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 MTFR1Q15390 333 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 REEP2Q9BRK0 252 aa12.93□□□□□ -0.34
HCFC1-202ENST00000369984 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.93□□□□□ -0.34
HCFC1-202ENST00000369984 PRRG1O14668 218 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 TRIM24O15164 1050 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 EPB42P16452 691 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 HNRNPH1P31943 449 aaKnown RBP12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ETFBP38117 255 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 KLK7P49862 253 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ITIH4Q14624 930 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ALFQ53S48 1182 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 SCFD2Q8WU76 684 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 GTF2A1LQ9UNN4 478 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 F8W810 466 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 STX5Q13190 355 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 PDIA5Q14554 519 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 STILQ15468 1287 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 TMEM143Q96AN5 459 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 TRIM9Q9C026 710 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ISCUQ9H1K1 167 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 KIAA0391O15091 583 aaKnown RBP12.92□□□□□ -0.34
HCFC1-202ENST00000369984 DPYDQ12882 1025 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 LRRC71Q8N4P6 559 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 C7orf25Q9BPX7 421 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 TSEN34Q9BSV6 310 aaKnown RBP12.92□□□□□ -0.34
HCFC1-202ENST00000369984 NMRK1Q9NWW6 199 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 SSU72P8A0A1W2PR75 194 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 MAP3K13O43283 966 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 COMTP21964 271 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 TGM2P21980 687 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 IRAK1P51617 712 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 COX10Q12887 443 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 KBTBD12Q3ZCT8 623 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 SCUBE1Q8IWY4 988 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ZNF333Q96JL9 665 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 FANCEQ9HB96 536 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 WWOXQ9NZC7 414 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ZCCHC18P0CG32 403 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 MFSD4BQ5TF39 518 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 SNX30Q5VWJ9 437 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 MRPL48Q96GC5 212 aaKnown RBP12.92□□□□□ -0.34
HCFC1-202ENST00000369984 KLF6Q99612 283 aaPredicted RBP12.92□□□□□ -0.34
HCFC1-202ENST00000369984 SHCBP1LQ9BZQ2 653 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 HAO1Q9UJM8 370 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 EIF3LQ9Y262 564 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms