RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CDH9Q9ULB4 789 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 PRG3Q9Y2Y8 225 aaPredicted RBP25.27■■□□□ 1.64
SNX3-203ENST00000368979 NRP1O14786 923 aa25.26■■□□□ 1.63
SNX3-203ENST00000368979 DGKIO75912 1065 aa25.26■■□□□ 1.63
SNX3-203ENST00000368979 TKTP29401 623 aaKnown RBP25.26■■□□□ 1.63
SNX3-203ENST00000368979 PEX26Q7Z412 305 aa25.26■■□□□ 1.63
SNX3-203ENST00000368979 ANKRD52Q8NB46 1076 aa25.26■■□□□ 1.63
SNX3-203ENST00000368979 SLC2A14Q8TDB8 520 aa25.26■■□□□ 1.63
SNX3-203ENST00000368979 HCSTQ9UBK5 93 aa25.26■■□□□ 1.63
SNX3-203ENST00000368979 TJP2Q9UDY2 1190 aa25.26■■□□□ 1.63
SNX3-203ENST00000368979 HYOU1Q9Y4L1 999 aa25.26■■□□□ 1.63
SNX3-203ENST00000368979 EFCAB14O75071 495 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 ERBB2P04626 1255 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 PCSK1P29120 753 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 ADORA2BP29275 332 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 BCAT1P54687 386 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 BST2Q10589 180 aaKnown RBP25.25■■□□□ 1.63
SNX3-203ENST00000368979 CCDC142Q17RM4 750 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 CYP4A22Q5TCH4 519 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 FUKQ8N0W3 1084 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 C3orf20Q8ND61 904 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 SLC35F5Q8WV83 523 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 TOP1MTQ969P6 601 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 C18orf8Q96DM3 657 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 MARCH5Q9NX47 278 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 ANAPC7Q9UJX3 599 aa25.25■■□□□ 1.63
SNX3-203ENST00000368979 PACSIN2Q9UNF0 486 aaPredicted RBP25.25■■□□□ 1.63
SNX3-203ENST00000368979 UPP2O95045 317 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 SLC11A1P49279 550 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 PDE4CQ08493 712 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 MDH1BQ5I0G3 518 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 PPP1R15BQ5SWA1 713 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 XYLT1Q86Y38 959 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 STK32AQ8WU08 396 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 BTBD6Q96KE9 485 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 ACBD6Q9BR61 282 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 WDR35Q9P2L0 1181 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 ADAM28Q9UKQ2 775 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 AMFRQ9UKV5 643 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 ALG6Q9Y672 507 aa25.24■■□□□ 1.63
SNX3-203ENST00000368979 TULP2O00295 520 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 AMHP03971 560 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 TCP1P17987 556 aaKnown RBP25.23■■□□□ 1.63
SNX3-203ENST00000368979 MESDQ14696 234 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 OVOS1Q6IE37 1185 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 DNAJC24Q6P3W2 148 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 PAQR9Q6ZVX9 377 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 FEZF2Q8TBJ5 459 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 IPO4Q8TEX9 1081 aaKnown RBP25.23■■□□□ 1.63
SNX3-203ENST00000368979 HES6Q96HZ4 224 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 OSBPL9Q96SU4 736 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 COLEC11Q9BWP8 271 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 SLC4A5Q9BY07 1137 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 TRIM7Q9C029 511 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 IL23AQ9NPF7 189 aa25.23■■□□□ 1.63
SNX3-203ENST00000368979 TRAPPC3O43617 180 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 SRGAP2O75044 1071 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 TADA2AO75478 443 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 BAIAP3O94812 1187 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 ALDH2P05091 517 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 WDR5P61964 334 aaKnown RBP25.22■■□□□ 1.63
SNX3-203ENST00000368979 ZNF268Q14587 947 aaPredicted RBP25.22■■□□□ 1.63
SNX3-203ENST00000368979 RPS6KA1Q15418 735 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 WHAMMP3Q1A5X7 153 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 INTS6LQ5JSJ4 861 aaKnown RBP25.22■■□□□ 1.63
SNX3-203ENST00000368979 PMF1Q6P1K2 205 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 MYCBPAPQ8TBZ2 947 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 MIS12Q9H081 205 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 SYNCQ9H7C4 482 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 FAN1Q9Y2M0 1017 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 MYBPHLA2RUH7 354 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 GJB6O95452 261 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 GALTP07902 379 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 ACRP10323 421 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 RPL34P49207 117 aaKnown RBP25.22■■□□□ 1.63
SNX3-203ENST00000368979 DEFB103AP81534 67 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 PLCB3Q01970 1234 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 TAP1Q03518 808 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 PTPROQ16827 1216 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 MYRIPQ8NFW9 859 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 UBE2Q2Q8WVN8 375 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 ZNF689Q96CS4 500 aaPredicted RBP25.22■■□□□ 1.63
SNX3-203ENST00000368979 MCRS1Q96EZ8 462 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 PKMYT1Q99640 499 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 B3GNT5Q9BYG0 378 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 RC3H2Q9HBD1 1191 aaKnown RBP25.22■■□□□ 1.63
SNX3-203ENST00000368979 ST7Q9NRC1 585 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 PCDH10Q9P2E7 1040 aa25.22■■□□□ 1.63
SNX3-203ENST00000368979 TMEM191CA6NGB0 347 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 TMEM110-MUSTN1A8MSY1 372 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 E5RJQ4 531 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 SYN3O14994 580 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 SLU7O95391 586 aaKnown RBP25.21■■□□□ 1.63
SNX3-203ENST00000368979 COMTP21964 271 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 YWHAHQ04917 246 aaPredicted RBP25.21■■□□□ 1.63
SNX3-203ENST00000368979 FAM171BQ6P995 826 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 TMEM110Q86TL2 294 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 THEM5Q8N1Q8 247 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 OR10T2Q8NGX3 314 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 PCED1BQ96HM7 432 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms