RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ALKBH8Q96BT7 664 aaKnown RBP15.01□□□□□ -0.01
CD48-201ENST00000368045 DHRS4Q9BTZ2 278 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 GGT7Q9UJ14 662 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 PNMA3Q9UL41 463 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 CLUHO75153 1309 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 LCTP09848 1927 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 LRCH4O75427 683 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 LGR5O75473 907 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 CA4P22748 312 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 KDELR1P24390 212 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 GBP2P32456 591 aaPredicted RBP15.01□□□□□ -0.01
CD48-201ENST00000368045 RFC1P35251 1148 aaPredicted RBP15.01□□□□□ -0.01
CD48-201ENST00000368045 TCF7P36402 384 aaPredicted RBP15.01□□□□□ -0.01
CD48-201ENST00000368045 MSH2P43246 934 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 GPX6P59796 221 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 TFAMQ00059 246 aaKnown RBP15.01□□□□□ -0.01
CD48-201ENST00000368045 FSTL1Q12841 308 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 TFDP1Q14186 410 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 ZNF394Q53GI3 561 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 CYP4A22Q5TCH4 519 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 FAM47EQ6ZV65 393 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 AGGF1Q8N302 714 aaeCLIP15.01□□□□□ -0.01
CD48-201ENST00000368045 ACTL9Q8TC94 416 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 PYROXD1Q8WU10 500 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 RSAD2Q8WXG1 361 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 CPT1BQ92523 772 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 HAUS1Q96CS2 278 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 BCO2Q9BYV7 579 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 ACSS3Q9H6R3 686 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 PTPRHQ9HD43 1115 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 RABGEF1Q9UJ41 708 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 DOCK5Q9H7D0 1870 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 FZD9O00144 591 aa15□□□□□ -0.01
CD48-201ENST00000368045 ACKR2O00590 384 aa15□□□□□ -0.01
CD48-201ENST00000368045 CST8O60676 142 aa15□□□□□ -0.01
CD48-201ENST00000368045 KRT16P08779 473 aa15□□□□□ -0.01
CD48-201ENST00000368045 ELF1P32519 619 aa15□□□□□ -0.01
CD48-201ENST00000368045 RPA3P35244 121 aaPredicted RBP15□□□□□ -0.01
CD48-201ENST00000368045 PSMC1P62191 440 aaKnown RBP15□□□□□ -0.01
CD48-201ENST00000368045 ADCY1Q08828 1119 aa15□□□□□ -0.01
CD48-201ENST00000368045 MYO1EQ12965 1108 aa15□□□□□ -0.01
CD48-201ENST00000368045 CBLBQ13191 982 aa15□□□□□ -0.01
CD48-201ENST00000368045 DNAJC3Q13217 504 aa15□□□□□ -0.01
CD48-201ENST00000368045 E2F5Q15329 346 aa15□□□□□ -0.01
CD48-201ENST00000368045 ANGEL2Q5VTE6 544 aaKnown RBP15□□□□□ -0.01
CD48-201ENST00000368045 WDR78Q5VTH9 848 aa15□□□□□ -0.01
CD48-201ENST00000368045 SCARA3Q6AZY7 606 aa15□□□□□ -0.01
CD48-201ENST00000368045 ADGRD1Q6QNK2 874 aa15□□□□□ -0.01
CD48-201ENST00000368045 PLPPR4Q7Z2D5 763 aa15□□□□□ -0.01
CD48-201ENST00000368045 RNF149Q8NC42 400 aa15□□□□□ -0.01
CD48-201ENST00000368045 INPP5DQ92835 1189 aa15□□□□□ -0.01
CD48-201ENST00000368045 L3MBTL3Q96JM7 780 aaPredicted RBP15□□□□□ -0.01
CD48-201ENST00000368045 TMEM237Q96Q45 408 aa15□□□□□ -0.01
CD48-201ENST00000368045 MPHOSPH6Q99547 160 aaKnown RBP15□□□□□ -0.01
CD48-201ENST00000368045 LRMDAQ9H2I8 198 aa15□□□□□ -0.01
CD48-201ENST00000368045 NOP53Q9NZM5 478 aaKnown RBP15□□□□□ -0.01
CD48-201ENST00000368045 EPB41L3Q9Y2J2 1087 aaPredicted RBP15□□□□□ -0.01
CD48-201ENST00000368045 GJA3Q9Y6H8 435 aa15□□□□□ -0.01
CD48-201ENST00000368045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.99□□□□□ -0.01
CD48-201ENST00000368045 SOWAHBA6NEL2 793 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 GOLGA8SH3BPF8 625 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 APOC4-APOC2K7ER74 178 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 TM9SF1O15321 606 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 APOC2P02655 101 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 CD19P15391 556 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 ATP2A2P16615 1042 aaKnown RBP14.99□□□□□ -0.01
CD48-201ENST00000368045 RPL22P35268 128 aaKnown RBP14.99□□□□□ -0.01
CD48-201ENST00000368045 ATP11AP98196 1134 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 PDE4CQ08493 712 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 ATF7IP2Q5U623 682 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 TLDC1Q6P9B6 456 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 SCARA5Q6ZMJ2 495 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 PDIK1LQ8N165 341 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 C4orf33Q8N1A6 199 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 ARFGAP1Q8N6T3 406 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 ANKLE1Q8NAG6 615 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 CMASQ8NFW8 434 aaPredicted RBP14.99□□□□□ -0.01
CD48-201ENST00000368045 ACSF2Q96CM8 615 aaPredicted RBP14.99□□□□□ -0.01
CD48-201ENST00000368045 LRRC37BQ96QE4 947 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 FZD8Q9H461 694 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 FAM124BQ9H5Z6 455 aaPredicted RBP14.99□□□□□ -0.01
CD48-201ENST00000368045 ZWILCHQ9H900 591 aa14.99□□□□□ -0.01
CD48-201ENST00000368045 HNRNPCL1O60812 293 aaKnown RBP14.98□□□□□ -0.01
CD48-201ENST00000368045 SRGAP2CP0DJJ0 459 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 IL1R2P27930 398 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 GABRB2P47870 512 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 IRX3P78415 501 aaPredicted RBP14.98□□□□□ -0.01
CD48-201ENST00000368045 SLC1A5Q15758 541 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 ZNF667Q5HYK9 610 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 FYB2Q5VWT5 728 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 VSIG1Q86XK7 387 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 XYLT1Q86Y38 959 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 JOSD2Q8TAC2 188 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 AGAP11Q8TF27 550 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 MCRS1Q96EZ8 462 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 MYLK2Q9H1R3 596 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 CXorf56Q9H5V9 222 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 CYP3A43Q9HB55 503 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 MCF2LO15068 1137 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 SPAG6O75602 509 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms