RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 AKAP3O75969 853 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 NOL4O94818 638 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 PRAMEF12O95522 483 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 DCNP07585 359 aaKnown RBP11.07□□□□□ -0.64
YBX3-203ENST00000366286 TRIM49P0CI25 452 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 TRIM49CP0CI26 452 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 CSH1P0DML2 217 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 CSH2P0DML3 217 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 PSMC3P17980 439 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 BDNFP23560 247 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 GDI1P31150 447 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 GNL1P36915 607 aaPredicted RBP11.07□□□□□ -0.64
YBX3-203ENST00000366286 PIK3CAP42336 1068 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 MAGEA11P43364 429 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 RAP1GAPP47736 663 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 NLRP12P59046 1061 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 RPL10AP62906 217 aaKnown RBP11.07□□□□□ -0.64
YBX3-203ENST00000366286 CYP27A1Q02318 531 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 PRKCQQ04759 706 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 SLC44A4Q53GD3 710 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 ZNF667Q5HYK9 610 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 MDH1BQ5I0G3 518 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 TPRG1Q6ZUI0 275 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 TMEM150AQ86TG1 271 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 GPIHBP1Q8IV16 184 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 ARID3BQ8IVW6 561 aaPredicted RBP11.07□□□□□ -0.64
YBX3-203ENST00000366286 SCN4BQ8IWT1 228 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 FAM186BQ8IYM0 893 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 PJA1Q8NG27 643 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 DNASE1L2Q92874 299 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 PCED1BQ96HM7 432 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 SHDQ96IW2 340 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 PHOX2BQ99453 314 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 DDX23Q9BUQ8 820 aaKnown RBP11.07□□□□□ -0.64
YBX3-203ENST00000366286 TRMT61BQ9BVS5 477 aaKnown RBP11.07□□□□□ -0.64
YBX3-203ENST00000366286 BRD9Q9H8M2 597 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 VRTNQ9H8Y1 702 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 HEBP1Q9NRV9 189 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 FAM86C1Q9NVL1 165 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 RMND1Q9NWS8 449 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 CIZ1Q9ULV3 898 aaPredicted RBP11.07□□□□□ -0.64
YBX3-203ENST00000366286 KIAA1549LQ6ZVL6 1849 aa11.07□□□□□ -0.64
YBX3-203ENST00000366286 KANSL1LA0AUZ9 987 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 SLC38A8A6NNN8 435 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 H0Y858 1186 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 LRRN2O75325 713 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 F11P03951 625 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 RPL13P26373 211 aaKnown RBP11.06□□□□□ -0.64
YBX3-203ENST00000366286 PRCPP42785 496 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 VAMP7P51809 220 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 MAPRE1Q15691 268 aaKnown RBP11.06□□□□□ -0.64
YBX3-203ENST00000366286 EDRF1Q3B7T1 1238 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 ZNF658Q5TYW1 1059 aaPredicted RBP11.06□□□□□ -0.64
YBX3-203ENST00000366286 INTS8Q75QN2 995 aaKnown RBP11.06□□□□□ -0.64
YBX3-203ENST00000366286 SV2AQ7L0J3 742 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 MFSD6LQ8IWD5 586 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 DTWD2Q8NBA8 298 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 SPATA20Q8TB22 786 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 MYCBPAPQ8TBZ2 947 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 IRF7Q92985 503 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 SMARCE1Q969G3 411 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 E2F7Q96AV8 911 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 TRMT2BQ96GJ1 504 aaKnown RBP11.06□□□□□ -0.64
YBX3-203ENST00000366286 TIGD1Q96MW7 591 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 GSDMAQ96QA5 445 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 SMG9Q9H0W8 520 aaKnown RBP11.06□□□□□ -0.64
YBX3-203ENST00000366286 SDCBP2Q9H190 292 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 TASP1Q9H6P5 420 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 DLGAP2Q9P1A6 1054 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 MAGEC2Q9UBF1 373 aaPredicted RBP11.06□□□□□ -0.64
YBX3-203ENST00000366286 SIT1Q9Y3P8 196 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 PCDHA5Q9Y5H7 936 aa11.06□□□□□ -0.64
YBX3-203ENST00000366286 A8MXQ7 604 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 ARNTLO00327 626 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 DPYSL4O14531 572 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 IKBKBO14920 756 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 ZNF263O14978 683 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
YBX3-203ENST00000366286 SMC2O95347 1197 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 HLA-DRAP01903 254 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 FAM163BP0C2L3 166 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 KRT13P13646 458 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 GLULP15104 373 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 PTPN1P18031 435 aaKnown RBP11.05□□□□□ -0.64
YBX3-203ENST00000366286 CD72P21854 359 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 WEE1P30291 646 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
YBX3-203ENST00000366286 PSMC2P35998 433 aaKnown RBP11.05□□□□□ -0.64
YBX3-203ENST00000366286 GRIK1P39086 918 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 GCLMP48507 274 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 CDH8P55286 799 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 PPP3CAQ08209 521 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 FCHO2Q0JRZ9 810 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 ADAM9Q13443 819 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 UBXN2BQ14CS0 331 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 COBLL1Q53SF7 1204 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 SPOPLQ6IQ16 392 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 VSTM1Q6UX27 236 aa11.05□□□□□ -0.64
YBX3-203ENST00000366286 YAF2Q8IY57 180 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms