RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 USP25Q9UHP3 1055 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ZMYM5Q9UJ78 669 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TULP1O00294 542 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ATP2C2O75185 946 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TACC1O75410 805 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TADA3O75528 432 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MYL1P05976 194 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 DLATP10515 647 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CHRNB1P11230 501 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TNNI1P19237 187 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MAGEA11P43364 429 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CYP2J2P51589 502 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 RPL10AP62906 217 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 KRT85P78386 507 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ARHGAP29Q52LW3 1261 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 WDR44Q5JSH3 913 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SDHAF4Q5VUM1 108 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CMTM8Q8IZV2 173 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 STKLD1Q8NE28 680 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FAM3CQ92520 227 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SPATA32Q96LK8 384 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 XYLT2Q9H1B5 865 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PRMT8Q9NR22 394 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SPATA6Q9NWH7 488 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CDH9Q9ULB4 789 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 R4GN57 208 aa14.65□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GVINP1Q7Z2Y8 2422 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 FAM186AA6NE01 2351 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PTPRDP23468 1912 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GREB1Q4ZG55 1949 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SLC38A8A6NNN8 435 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TDGF1P13385 188 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 DDX6P26196 483 aaKnown RBP eCLIP14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 NDUFA8P51970 172 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CELF5Q8N6W0 485 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GOLGA5Q8TBA6 731 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 BPIFB1Q8TDL5 484 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PARD3BQ8TEW8 1205 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CCDC127Q96BQ5 260 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MSANTD3Q96H12 275 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ZFYVE19Q96K21 471 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CEP295NLQ96MC4 621 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 FNBP1Q96RU3 617 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 FAM83CQ9BQN1 747 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SYT15Q9BQS2 421 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CHRDQ9H2X0 955 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 VRTNQ9H8Y1 702 aa14.64□□□□□ -0.07
TNFRSF1A-202ENST00000366159 DMXL1Q9Y485 3027 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 DCHS1Q96JQ0 3298 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 A0A1W2PQ27 194 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 A0A1W2PQ64 194 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 A0A1W2PQD8 194 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PDXKO00764 312 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 DPYSL4O14531 572 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 LAMTOR5O43504 91 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 EXOC3O60645 756 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 C4BPAP04003 597 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CCNE1P24864 410 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CASP4P49662 377 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MYL6P60660 151 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MTAPQ13126 283 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GAS6Q14393 721 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TAF12Q16514 161 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TXNDC8Q6A555 127 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 C1orf228Q6PIY5 440 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TXNDC11Q6PKC3 985 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MON1AQ86VX9 555 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SPATA2LQ8IUW3 424 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 YAF2Q8IY57 180 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MAB21L3Q8N8X9 362 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ZBTB44Q8NCP5 570 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 RIN3Q8TB24 985 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 USP13Q92995 863 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SPATA17Q96L03 361 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GCNAQ96QF7 691 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MRPL45Q9BRJ2 306 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SMG9Q9H0W8 520 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 C8orf33Q9H7E9 229 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 LMAN1LQ9HAT1 526 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GTSE1Q9NYZ3 720 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 NDRG2Q9UN36 371 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CCL26Q9Y258 94 aa14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 R3HCC1Q9Y3T6 440 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PTPRZ1P23471 2315 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 LRRIQ3A6PVS8 624 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SPECC1L-ADORA2AF8WAN1 911 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 LILRB5O75023 590 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 RHOBTB3O94955 611 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 LMNAP02545 664 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 RPN1P04843 607 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PDGFRBP09619 1106 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ATICP31939 592 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GNL1P36915 607 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SYKP43405 635 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SOX9P48436 509 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PSMC1P62191 440 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PLCB2Q00722 1185 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 DPYDQ12882 1025 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ZNF268Q14587 947 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms