RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 PXNP49023 591 aaPredicted RBP3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 HK3P52790 923 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 POLGP54098 1239 aaPredicted RBP3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 TPTEP56180 551 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 LOXL3P58215 753 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 HOXA4Q00056 320 aaPredicted RBP3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 SP2Q02086 613 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 EXOSC9Q06265 439 aaKnown RBP3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 FHL1Q13642 323 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 GTF2H3Q13889 308 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 FAM50AQ14320 339 aaKnown RBP3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 LONRF3Q496Y0 759 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 ARHGAP40Q5TG30 622 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 PXDC1Q5TGL8 231 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 EGFLAMQ63HQ2 1017 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 AWAT2Q6E213 333 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 CATSPERGQ6ZRH7 1159 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 CHSY1Q86X52 802 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 PPP1R3BQ86XI6 285 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 PCSK9Q8NBP7 692 aaKnown RBP3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 ATG4AQ8WYN0 398 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 R3HDM4Q96D70 268 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 ASB2Q96Q27 587 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 CAMKK2Q96RR4 588 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 WACQ9BTA9 647 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 FSD1LQ9BXM9 530 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 SLC13A1Q9BZW2 595 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 GLOD4Q9HC38 313 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 PDGFCQ9NRA1 345 aa3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 CCNL1Q9UK58 526 aaPredicted RBP3.08□□□□□ -1.92
RNU4-42P-201ENST00000364738 CACNA1IQ9P0X4 2223 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 DCLK1O15075 740 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 UNC5CO95185 931 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 ZRANB2O95218 330 aaKnown RBP eCLIP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 NTN1O95631 604 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 TYRP14679 529 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 CDK11BP21127 795 aaKnown RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 CCND1P24385 295 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 CDKN1CP49918 316 aaPredicted RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 LILRA4P59901 499 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 GPSM2P81274 684 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 RABEP1Q15276 862 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 ZNF260Q3ZCT1 412 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 RGS7BPQ6MZT1 257 aaPredicted RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 MIS18BP1Q6P0N0 1132 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 KIRREL2Q6UWL6 708 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 PARS2Q7L3T8 475 aaKnown RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 C8orf58Q8NAV2 365 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 RP9Q8TA86 221 aaKnown RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 BRIX1Q8TDN6 353 aaKnown RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 XAGE5Q8WWM1 108 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 GLG1Q92896 1179 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 DAZAP1Q96EP5 407 aaKnown RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 HMCESQ96FZ2 354 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 RITA1Q96K30 269 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 FAM167AQ96KS9 214 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 PUS7Q96PZ0 661 aaKnown RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 SMAD5Q99717 465 aaKnown RBP3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 PTDSS2Q9BVG9 487 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 SSX2IPQ9Y2D8 614 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 PCDHA1Q9Y5I3 950 aa3.07□□□□□ -1.92
RNU4-42P-201ENST00000364738 CYP2D7A0A087X1C5 515 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 A1L4Q6 167 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 H7C1Q1 480 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 EXOC3O60645 756 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 USP1O94782 785 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 TNKSO95271 1327 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 PDCP20941 246 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 MAP2K6P52564 334 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 LAMB3Q13751 1172 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 IQCB1Q15051 598 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 TRIP6Q15654 476 aaKnown RBP3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 CERKLQ49MI3 558 aaPredicted RBP3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 Q4G0T1 1027 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 CCDC157Q569K6 752 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 FCRL6Q6DN72 434 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 PRSS3P2Q8NHM4 247 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 PNPOQ9NVS9 261 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 TRNAU1APQ9NX07 287 aaKnown RBP3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 KLHL13Q9P2N7 655 aa3.06□□□□□ -1.92
RNU4-42P-201ENST00000364738 WDR17Q8IZU2 1322 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 H3BUI4 141 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 BCAR3O75815 825 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 PDE8BO95263 885 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 GRPP07492 148 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 NR4A2P43354 598 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 RECQLP46063 649 aaPredicted RBP3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 KCNJ5P48544 419 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 SOX8P57073 446 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 SATB1Q01826 763 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 E2F2Q14209 437 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 DAZAP2Q15038 168 aaPredicted RBP3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 LRRC41Q15345 812 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 RNF187Q5TA31 235 aaPredicted RBP3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 EMC10Q5UCC4 262 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 SERPINA13PQ6UXR4 307 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 ZNF517Q6ZMY9 492 aaPredicted RBP3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 Q6ZWC4 215 aa3.05□□□□□ -1.92
RNU4-42P-201ENST00000364738 USP45Q70EL2 814 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms