RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TANGO2Q6ICL3 276 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 USP49Q70CQ1 688 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 SGMS1Q86VZ5 419 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 NSUN7Q8NE18 718 aaKnown RBP4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 SMCR8Q8TEV9 937 aaPredicted RBP4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 IPO4Q8TEX9 1081 aaKnown RBP4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 GCC1Q96CN9 775 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 DCLRE1CQ96SD1 692 aaKnown RBP4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 GPR87Q9BY21 358 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 TTYH3Q9C0H2 523 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 XYLT2Q9H1B5 865 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 AS3MTQ9HBK9 375 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 SAGE1Q9NXZ1 904 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 LRFN1Q9P244 771 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 DNMT3BQ9UBC3 853 aaKnown RBP4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 CHST2Q9Y4C5 530 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 CDY1Q9Y6F8 540 aa4.43□□□□□ -1.7
RNU6-28P-201ENST00000362378 OTOL1A6NHN0 477 aaPredicted RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 AQP12BA6NM10 295 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 GRXCR1A8MXD5 290 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 TRIM24O15164 1050 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 RRP9O43818 475 aaKnown RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SH3BP5O60239 455 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SPATA31D3P0C874 917 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 BMP7P18075 431 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 APOBEC3AP31941 199 aaPredicted RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 PTDSS1P48651 473 aaKnown RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 MAN2A2P49641 1150 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ANXA11P50995 505 aaKnown RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SCNN1GP51170 649 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 DGKEP52429 567 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ARL4CP56559 192 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 LILRA4P59901 499 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 RNASE9P60153 205 aaKnown RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SATB1Q01826 763 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SLC5A9Q2M3M2 681 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ALFQ53S48 1182 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 CRTC1Q6UUV9 634 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 GLB1LQ6UWU2 654 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 LAYNQ6UX15 382 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SLC30A10Q6XR72 485 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 Q6ZRM9 215 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 LRRC55Q6ZSA7 311 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SPATA31D4Q6ZUB0 917 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 LIMS2Q7Z4I7 341 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZNF280BQ86YH2 543 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SIAH1Q8IUQ4 282 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ANKRD18AQ8IVF6 992 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZNF808Q8N4W9 903 aaPredicted RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 Q8TCH9 128 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 STYXQ8WUJ0 223 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 TRIM63Q969Q1 353 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 FAM89AQ96GI7 184 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 PAGR1Q9BTK6 254 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SLC46A2Q9BY10 475 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZBTB26Q9HCK0 441 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZMYND8Q9ULU4 1186 aaPredicted RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 CA14Q9ULX7 337 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 USP15Q9Y4E8 981 aaPredicted RBP4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 XDHP47989 1333 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 SPATA31A3Q5VYP0 1347 aa4.42□□□□□ -1.7
RNU6-28P-201ENST00000362378 A0A1W2PS29 197 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 M0R3H8 397 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 PIP5K1BO14986 540 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZNF185O15231 689 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 GLP2RO95838 553 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 GPANK1O95872 356 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 ELANEP08246 267 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 CHRM3P20309 590 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 KCNA3P22001 575 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 SLC5A2P31639 672 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 ATICP31939 592 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 PXNP49023 591 aaPredicted RBP4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 HSD11B2P80365 405 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 OCA2Q04671 838 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 PRKG1Q13976 671 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 POSTNQ15063 836 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 TRIM71Q2Q1W2 868 aaKnown RBP4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 PDCD4Q53EL6 469 aaKnown RBP4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 TMTC4Q5T4D3 741 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 RAP1GAP2Q684P5 730 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 MRNIPQ6NTE8 343 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 FOXR2Q6PJQ5 311 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 KCTD20Q7Z5Y7 419 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 CLNKQ7Z7G1 428 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 MAPKAPK5Q8IW41 473 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 CCDC28AQ8IWP9 274 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 GALNT15Q8N3T1 639 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 STT3BQ8TCJ2 826 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 BPIFB1Q8TDL5 484 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 EDAQ92838 391 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 FAM227BQ96M60 508 aa4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 RBM15Q96T37 977 aaKnown RBP eCLIP4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 NAP1L4Q99733 375 aaKnown RBP4.41□□□□□ -1.7
RNU6-28P-201ENST00000362378 PTDSS2Q9BVG9 487 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms