RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 EPS8L3Q8TE67 593 aaKnown RBP23.83■■□□□ 1.41
LDB1-201ENST00000361198 ACSF2Q96CM8 615 aaPredicted RBP23.83■■□□□ 1.41
LDB1-201ENST00000361198 ADPGKQ9BRR6 497 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 KDM4CQ9H3R0 1056 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 GINS2Q9Y248 185 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 KRT3P12035 628 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 ATF7P17544 494 aaPredicted RBP23.82■■□□□ 1.4
LDB1-201ENST00000361198 VPS41P49754 854 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 GTF2A1P52655 376 aaPredicted RBP23.82■■□□□ 1.4
LDB1-201ENST00000361198 ZNF410Q86VK4 478 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 TAX1BP1Q86VP1 789 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 JOSD2Q8TAC2 188 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 UHMK1Q8TAS1 419 aaKnown RBP23.82■■□□□ 1.4
LDB1-201ENST00000361198 SELENOSQ9BQE4 189 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 DPP3Q9NY33 737 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 C2CD2Q9Y426 696 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 SIGLEC16A6NMB1 481 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 CELF2O95319 508 aaKnown RBP23.82■■□□□ 1.4
LDB1-201ENST00000361198 CETN2P41208 172 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 PRAMEF19Q5SWL8 479 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 PIGWQ7Z7B1 504 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 CYP3A43Q9HB55 503 aa23.82■■□□□ 1.4
LDB1-201ENST00000361198 GHRP10912 638 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 CHKAP35790 457 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 ADCY8P40145 1251 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 ITGA8P53708 1063 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 PSMC1P62191 440 aaKnown RBP23.81■■□□□ 1.4
LDB1-201ENST00000361198 C2orf69Q8N8R5 385 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 FAM49AQ9H0Q0 323 aaPredicted RBP23.81■■□□□ 1.4
LDB1-201ENST00000361198 CXCL16Q9H2A7 254 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 INTS9Q9NV88 658 aaKnown RBP23.81■■□□□ 1.4
LDB1-201ENST00000361198 ITGA11Q9UKX5 1188 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 SMIM23A6NLE4 172 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 MICAL2O94851 1124 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 ERBB2P04626 1255 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 P4HA1P13674 534 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 ATF2P15336 505 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 SPOCD1Q6ZMY3 1216 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 KIF12Q96FN5 646 aa23.81■■□□□ 1.4
LDB1-201ENST00000361198 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.81■■□□□ 1.42e-11■□□□□ 9.7
LDB1-201ENST00000361198 DYNC1LI2O43237 492 aaPredicted RBP23.8■■□□□ 1.4
LDB1-201ENST00000361198 PSMA2P25787 234 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 HOXA11P31270 313 aaPredicted RBP23.8■■□□□ 1.4
LDB1-201ENST00000361198 PRUNE1Q86TP1 453 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 XYLT1Q86Y38 959 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 ARFGAP1Q8N6T3 406 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 CCDC197Q8NCU1 140 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 ADAMTS10Q9H324 1103 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 CDC42EP4Q9H3Q1 356 aaKnown RBP23.8■■□□□ 1.4
LDB1-201ENST00000361198 GRM5P41594 1212 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 RBP5P82980 135 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 ZNF365Q70YC5 407 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 TAOK1Q7L7X3 1001 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 EMC1Q8N766 993 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 HEXIM2Q96MH2 286 aaKnown RBP23.8■■□□□ 1.4
LDB1-201ENST00000361198 SYNCQ9H7C4 482 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 CDHR5Q9HBB8 845 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 SLC40A1Q9NP59 571 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 CPA4Q9UI42 421 aa23.8■■□□□ 1.4
LDB1-201ENST00000361198 SLC15A5A6NIM6 579 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 M0QYV0 167 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 TJP3O95049 919 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 GPD2P43304 727 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 SLCO1A2P46721 670 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 SCTRP47872 440 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 DPH6Q7L8W6 267 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 TRAIPQ9BWF2 469 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 METTL5Q9NRN9 209 aaKnown RBP23.79■■□□□ 1.4
LDB1-201ENST00000361198 KLC4Q9NSK0 619 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 DNPEPQ9ULA0 475 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 BARX2Q9UMQ3 279 aaPredicted RBP23.79■■□□□ 1.4
LDB1-201ENST00000361198 SCN1AP35498 2009 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 hCG_1818297A0A087WSY0 165 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 LRRD1A4D1F6 860 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 LIASO43766 372 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 LRCH4O75427 683 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 NPTXRO95502 500 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 NDST1P52848 882 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 COPS2P61201 443 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 ITIH4Q14624 930 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 CHADLQ6NUI6 762 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 CCDC89Q8N998 374 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 SERPINB12Q96P63 405 aa23.79■■□□□ 1.4
LDB1-201ENST00000361198 DDX23Q9BUQ8 820 aaKnown RBP23.79■■□□□ 1.4
LDB1-201ENST00000361198 RRN3P2A6NIE6 340 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 A6NJR5 290 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 VDRP11473 427 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 CDKN2BP42772 138 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 MNAT1P51948 309 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 GSCP56915 257 aaPredicted RBP23.78■■□□□ 1.4
LDB1-201ENST00000361198 INCA1Q0VD86 236 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 CNGA2Q16280 664 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 TFDP3Q5H9I0 405 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 EXOC3L1Q86VI1 746 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 NT5DC4Q86YG4 428 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 DNAJC17Q9NVM6 304 aaKnown RBP23.78■■□□□ 1.4
LDB1-201ENST00000361198 DDX56Q9NY93 547 aaKnown RBP23.78■■□□□ 1.4
LDB1-201ENST00000361198 SNTG2Q9NY99 539 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 WDR35Q9P2L0 1181 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 ANAPC5Q9UJX4 755 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms