RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 AMPD2Q01433 879 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 PDGFRLQ15198 375 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 SF3A2Q15428 464 aaKnown RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 CCDC6Q16204 474 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 INTS6LQ5JSJ4 861 aaKnown RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 NAIF1Q69YI7 327 aaPredicted RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 CC2D1AQ6P1N0 951 aaPredicted RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 CACNA2D4Q7Z3S7 1137 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 KBTBD6Q86V97 674 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 TMEM86AQ8N2M4 240 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 LRRC52Q8N7C0 313 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 CACTINQ8WUQ7 758 aaKnown RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 TRMT2BQ96GJ1 504 aaKnown RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 LOXL4Q96JB6 756 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 FAM84AQ96KN4 292 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 MYRFLQ96LU7 910 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 POLR3BQ9NW08 1133 aaPredicted RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 RBAKQ9NYW8 714 aaPredicted RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 GTF3C4Q9UKN8 822 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 SLC8A2Q9UPR5 921 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 PTPRDP23468 1912 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 GOLGA8IPA6NC78 632 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 GOLGA8JA6NMD2 632 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 EPN2O95208 641 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 GCNT3O95395 438 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 LDHAP00338 332 aaKnown RBP16.16■□□□□ 0.18
GDPD3-201ENST00000360688 ZNF806P0C7X5 589 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 DRD1P21728 446 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 GJA4P35212 333 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 MYL7Q01449 175 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 FAM160A1Q05DH4 1040 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 CCDC142Q17RM4 750 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 AASDHQ4L235 1098 aaPredicted RBP16.16■□□□□ 0.18
GDPD3-201ENST00000360688 RRAGBQ5VZM2 374 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 SV2BQ7L1I2 683 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 OSTM1Q86WC4 334 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 CSGALNACT2Q8N6G5 542 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 CLIC6Q96NY7 704 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 SLC22A12Q96S37 553 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 CYP2S1Q96SQ9 504 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 BACH2Q9BYV9 841 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 OLFML3Q9NRN5 406 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 RXFP3Q9NSD7 469 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 GDAP2Q9NXN4 497 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 UXTQ9UBK9 157 aaPredicted RBP16.16■□□□□ 0.18
GDPD3-201ENST00000360688 SIX4Q9UIU6 781 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 PCDHB13Q9Y5F0 798 aa16.16■□□□□ 0.18
GDPD3-201ENST00000360688 SRPRBQ9Y5M8 271 aaKnown RBP16.16■□□□□ 0.18
GDPD3-201ENST00000360688 USP24Q9UPU5 2620 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 VPS37CA5D8V6 355 aaPredicted RBP16.15■□□□□ 0.18
GDPD3-201ENST00000360688 HCRTO43612 131 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 AKAP3O75969 853 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 LIMK1P53667 647 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 MTF1Q14872 753 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 ZNF77Q15935 545 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 CFAP221Q4G0U5 840 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 SYCP3Q8IZU3 236 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 CAMKK1Q8N5S9 505 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 TOP6BLQ8N6T0 577 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 C12orf50Q8NA57 414 aaPredicted RBP16.15■□□□□ 0.18
GDPD3-201ENST00000360688 SPATA18Q8TC71 538 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 DDX1Q92499 740 aaKnown RBP16.15■□□□□ 0.18
GDPD3-201ENST00000360688 P2RY13Q9BPV8 354 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 CBWD1Q9BRT8 395 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 FGFBP2Q9BYJ0 223 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 TMEM206Q9H813 350 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 ECT2Q9H8V3 914 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 PDE11AQ9HCR9 933 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 TRPC7Q9HCX4 862 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 SNX9Q9Y5X1 595 aa16.15■□□□□ 0.18
GDPD3-201ENST00000360688 GABRDO14764 452 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 KRT19P08727 400 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 USP17L7P0C7H9 530 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 IDEP14735 1019 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 TXLNAP40222 546 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 LHX1P48742 406 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 RBP5P82980 135 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 USP4Q13107 963 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 SOWAHAQ2M3V2 549 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 FBXO43Q4G163 708 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 PLA2G2CQ5R387 149 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 IL31Q6EBC2 164 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 SPATA2LQ8IUW3 424 aaPredicted RBP16.14■□□□□ 0.17
GDPD3-201ENST00000360688 ADGRF2Q8IZF7 708 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 CPA6Q8N4T0 437 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 OSCP1Q8WVF1 389 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 EZH1Q92800 747 aaPredicted RBP16.14■□□□□ 0.17
GDPD3-201ENST00000360688 ZC3H10Q96K80 434 aaKnown RBP16.14■□□□□ 0.17
GDPD3-201ENST00000360688 HHIPQ96QV1 700 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 MTMR12Q9C0I1 747 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 PCIF1Q9H4Z3 704 aa16.14■□□□□ 0.17
GDPD3-201ENST00000360688 DUS2Q9NX74 493 aaKnown RBP16.14■□□□□ 0.17
GDPD3-201ENST00000360688 NUP205Q92621 2012 aa16.13■□□□□ 0.17
GDPD3-201ENST00000360688 ABCA7Q8IZY2 2146 aa16.13■□□□□ 0.17
GDPD3-201ENST00000360688 TRAV19A0A0A6YYK7 116 aa16.13■□□□□ 0.17
GDPD3-201ENST00000360688 FRMD3A2A2Y4 597 aa16.13■□□□□ 0.17
GDPD3-201ENST00000360688 TM4SF5O14894 197 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms