RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 KRT7P08729 469 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 IL1R2P27930 398 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PHBP35232 272 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PSMC1P62191 440 aaKnown RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 IRX3P78415 501 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 CCDC15Q0P6D6 951 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ORC1Q13415 861 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 TFDP1Q14186 410 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 SETDB1Q15047 1291 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PDK4Q16654 411 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 HADHQ16836 314 aaKnown RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 CCDC142Q17RM4 750 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 IER5Q5VY09 327 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ANKRD22Q5VYY1 191 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ASRGL1Q7L266 308 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PCGF5Q86SE9 256 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 CDR2LQ86X02 465 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 RHPN2Q8IUC4 686 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PPIL6Q8IXY8 311 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 EMC1Q8N766 993 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 CEP120Q8N960 986 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ATP11CQ8NB49 1132 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 AGAP11Q8TF27 550 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PYROXD1Q8WU10 500 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 RSAD2Q8WXG1 361 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ANKRD36BP1Q96IX9 119 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 NLRP4Q96MN2 994 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 MAF1Q9H063 256 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 XYLT2Q9H1B5 865 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PPCSQ9HAB8 311 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 METTL5Q9NRN9 209 aaKnown RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 A0A1B0GUA9 196 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 A0A1W2PPM1 405 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 ABLIM1O14639 778 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 PIAS1O75925 651 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 UNC5CO95185 931 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 CD48P09326 243 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 CCNB1P14635 433 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 KRT4P19013 534 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 SSTR1P30872 391 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 SKIV2L2P42285 1042 aaKnown RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 MSH2P43246 934 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 SLC18A1P54219 525 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 ARL4CP56559 192 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 GEMIN4P57678 1058 aaKnown RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 GPX6P59796 221 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 YWHAEP62258 255 aaKnown RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 SLC1A5Q15758 541 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 LY6KQ17RY6 165 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 HHATQ5VTY9 493 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 METTL7BQ6UX53 244 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 CPT1BQ92523 772 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 N4BP2L2Q92802 583 aaPredicted RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 FAM167AQ96KS9 214 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 MYLK2Q9H1R3 596 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 ETNK1Q9HBU6 452 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 TXLNGQ9NUQ3 528 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 GEMIN8Q9NWZ8 242 aaKnown RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 GGA3Q9NZ52 723 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 PPP1R1BQ9UD71 204 aaPredicted RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 CYTH4Q9UIA0 394 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 L3MBTL1Q9Y468 752 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 BRCA1P38398 1863 aaKnown RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 SOWAHBA6NEL2 793 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 SIGLEC16A6NMB1 481 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 MAGEB2O15479 319 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 MED7O43513 233 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 TYROBPO43914 113 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 ALADP13716 330 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 HIRAP54198 1017 aaPredicted RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 MXD4Q14582 209 aaPredicted RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 ACCSLQ4AC99 568 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 MSS51Q4VC12 460 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 EFHC2Q5JST6 749 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 FNBP1LQ5T0N5 605 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 TREML2Q5T2D2 321 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 LVRNQ6Q4G3 990 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 MPZL3Q6UWV2 235 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 RGS9BPQ6ZS82 235 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 BBS12Q6ZW61 710 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 NCAPG2Q86XI2 1143 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 VSIG1Q86XK7 387 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 ARFGAP1Q8N6T3 406 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 TTC13Q8NBP0 860 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 LRRC37BQ96QE4 947 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 CPXM1Q96SM3 734 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 MAK16Q9BXY0 300 aaKnown RBP9.02□□□□□ -0.97
RFX3-202ENST00000358730 PCSK1NQ9UHG2 260 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 USH1CQ9Y6N9 552 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 PTPRFP10586 1907 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 A0A0G2JMZ2 1700 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 LRRC37A2A6NM11 1700 aa9.02□□□□□ -0.97
RFX3-202ENST00000358730 INO80B-WBP1J3KQ70 363 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 B4GALT5O43286 388 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 EDF1O60869 148 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 GJB1P08034 283 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 CXCL8P10145 99 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms