RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TPP2P29144 1249 aaPredicted RBP19.56■□□□□ 0.72
SCARF1-202ENST00000348987 MYBPC2Q14324 1141 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 KRT72Q14CN4 511 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 LRRC36Q1X8D7 754 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 C2CD6Q53TS8 623 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 LLGL2Q6P1M3 1020 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 CEP128Q6ZU80 1094 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 PPP2R3CQ969Q6 453 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 CAMKK2Q96RR4 588 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 ZNF341Q9BYN7 854 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 PHACTR1Q9C0D0 580 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 NMUR2Q9GZQ4 415 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 FEM1BQ9UK73 627 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 PPM1HQ9ULR3 514 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 MTO1Q9Y2Z2 717 aaKnown RBP19.56■□□□□ 0.72
SCARF1-202ENST00000348987 F8W8V4 182 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 OR6B1O95007 311 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 FAM163BP0C2L3 166 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 PABPC4LP0CB38 370 aaKnown RBP19.56■□□□□ 0.72
SCARF1-202ENST00000348987 HARSP12081 509 aaKnown RBP19.56■□□□□ 0.72
SCARF1-202ENST00000348987 ARL4CP56559 192 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 GTF2BQ00403 316 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 PDIA2Q13087 525 aaKnown RBP19.56■□□□□ 0.72
SCARF1-202ENST00000348987 MTMR1Q13613 665 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 MDH1BQ5I0G3 518 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 ALYREFQ86V81 257 aaKnown RBP19.56■□□□□ 0.72
SCARF1-202ENST00000348987 FAM160B2Q86V87 743 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 SATL1Q86VE3 508 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 SLC25A41Q8N5S1 370 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 CCDC110Q8TBZ0 833 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 GMLQ99445 158 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 RAVER2Q9HCJ3 691 aaKnown RBP19.56■□□□□ 0.72
SCARF1-202ENST00000348987 CLIC5Q9NZA1 410 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 IL1RAPL1Q9NZN1 696 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 PCNTO95613 3336 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 DLDP09622 509 aaKnown RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 MYL2P10916 166 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 VAV1P15498 845 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 BPIFB4P59827 614 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 AP2B1P63010 937 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 TTLL12Q14166 644 aaPredicted RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 SNRNP35Q16560 246 aaKnown RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 FAM102BQ5T8I3 360 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 POTEAQ6S8J7 498 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 RAPH1Q70E73 1250 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 ANKMY2Q8IV38 441 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 SMC1BQ8NDV3 1235 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 OXNAD1Q96HP4 312 aaPredicted RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 TAAR1Q96RJ0 339 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 COL2A1P02458 1487 aaPredicted RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 TNS1Q9HBL0 1735 aaKnown RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 PFDN1O60925 122 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 CCNE2O96020 404 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 ASLP04424 464 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 ENO1P06733 434 aaKnown RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 GJC1P36383 396 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 MAGEA8P43361 318 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 RASA2Q15283 850 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 SPDYE2Q495Y8 402 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 ACBD5Q5T8D3 534 aaPredicted RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 MYLK4Q86YV6 388 aaPredicted RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 SCUBE1Q8IWY4 988 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 RBM15BQ8NDT2 890 aaKnown RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 TAS1R2Q8TE23 839 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 MPP4Q96JB8 637 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 MIS12Q9H081 205 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 HSFX1Q9UBD0 423 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 DNALI1O14645 258 aaPredicted RBP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 MAGEC1O60732 1142 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 NME8Q8N427 588 aa19.55■□□□□ 0.72
SCARF1-202ENST00000348987 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.55■□□□□ 0.72
SCARF1-202ENST00000348987 FAM237BA0A1B0GVD1 139 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 MYCLP12524 364 aaPredicted RBP19.54■□□□□ 0.72
SCARF1-202ENST00000348987 SLC1A1P43005 524 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 ACAD10Q6JQN1 1059 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 NET1Q7Z628 596 aaPredicted RBP19.54■□□□□ 0.72
SCARF1-202ENST00000348987 TMPRSS6Q8IU80 811 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 C12orf56Q8IXR9 622 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 SYTL5Q8TDW5 730 aaPredicted RBP19.54■□□□□ 0.72
SCARF1-202ENST00000348987 DNAJC1Q96KC8 554 aaKnown RBP19.54■□□□□ 0.72
SCARF1-202ENST00000348987 IWS1Q96ST2 819 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 PI4K2AQ9BTU6 479 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 THTPAQ9BU02 230 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 FOXP3Q9BZS1 431 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 VPS11Q9H270 941 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 SLC24A2Q9UI40 661 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 FZD1Q9UP38 647 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 TELO2Q9Y4R8 837 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 UBIAD1Q9Y5Z9 338 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 GOLGA8SH3BPF8 625 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 GOLGA8MH3BSY2 632 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 GEMIN4P57678 1058 aaKnown RBP19.54■□□□□ 0.72
SCARF1-202ENST00000348987 MAP7Q14244 749 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 RASSF3Q86WH2 238 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 HELQQ8TDG4 1101 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 SHC3Q92529 594 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 VTI1AQ96AJ9 217 aa19.54■□□□□ 0.72
SCARF1-202ENST00000348987 RGS17Q9UGC6 210 aaPredicted RBP19.54■□□□□ 0.72
SCARF1-202ENST00000348987 SLC7A8Q9UHI5 535 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms