RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 TMLHEQ9NVH6 421 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 USP25Q9UHP3 1055 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 FBXO4Q9UKT5 387 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 SOBPA7XYQ1 873 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 CLIC2O15247 247 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 MYL1P05976 194 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 CSH1P0DML2 217 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 CSH2P0DML3 217 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 DLATP10515 647 aaKnown RBP12.75□□□□□ -0.37
TUBD1-203ENST00000346141 TNNI1P19237 187 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 CMA1P23946 247 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 ACAT1P24752 427 aaKnown RBP12.75□□□□□ -0.37
TUBD1-203ENST00000346141 DDX6P26196 483 aaKnown RBP eCLIP12.75□□□□□ -0.37
TUBD1-203ENST00000346141 CYP2J2P51589 502 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 KRT85P78386 507 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 CYP4F8P98187 520 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 CYP24A1Q07973 514 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 KNOP1Q1ED39 458 aaKnown RBP12.75□□□□□ -0.37
TUBD1-203ENST00000346141 ARHGAP29Q52LW3 1261 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 SCARA3Q6AZY7 606 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 RDH13Q8NBN7 331 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 FAM3CQ92520 227 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 SPATA32Q96LK8 384 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 CGRRF1Q99675 332 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 IER2Q9BTL4 223 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 ATP6V1DQ9Y5K8 247 aa12.75□□□□□ -0.37
TUBD1-203ENST00000346141 ACTN4O43707 911 aaKnown RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 NUDT7P0C024 238 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 PFKFB1P16118 471 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 HMGA1P17096 107 aaKnown RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 AVPR1AP37288 418 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 NLRP12P59046 1061 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 PSMD2Q13200 908 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 FZD5Q13467 585 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 MAPRE1Q15691 268 aaKnown RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 C4orf50Q6ZRC1 276 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 OSTM1Q86WC4 334 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 SPATA2LQ8IUW3 424 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 GRAMD1CQ8IYS0 662 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 MAML2Q8IZL2 1156 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 ZNF687Q8N1G0 1237 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 CELF5Q8N6W0 485 aaKnown RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 CCDC127Q96BQ5 260 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 PAGE5Q96GU1 130 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 C8orf33Q9H7E9 229 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 EXOC1Q9NV70 894 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 UXTQ9UBK9 157 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 GTF3C4Q9UKN8 822 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 CDH9Q9ULB4 789 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 NDRG2Q9UN36 371 aaKnown RBP12.74□□□□□ -0.37
TUBD1-203ENST00000346141 R4GN57 208 aa12.74□□□□□ -0.37
TUBD1-203ENST00000346141 COL4A2P08572 1712 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 KLRC4O43908 158 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 EXOC3O60645 756 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 NOL4O94818 638 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 PRAMEF12O95522 483 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 LMNAP02545 664 aaKnown RBP12.73□□□□□ -0.37
TUBD1-203ENST00000346141 F11P03951 625 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 FAM163BP0C2L3 166 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
TUBD1-203ENST00000346141 CYP2F1P24903 491 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 MAGEA11P43364 429 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 GPR15P49685 360 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 KPNA1P52294 538 aaPredicted RBP12.73□□□□□ -0.37
TUBD1-203ENST00000346141 DDR2Q16832 855 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 FAM171BQ6P995 826 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 CMTM8Q8IZV2 173 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 BPIFB1Q8TDL5 484 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
TUBD1-203ENST00000346141 KBTBD7Q8WVZ9 684 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 MRPS31Q92665 395 aaKnown RBP12.73□□□□□ -0.37
TUBD1-203ENST00000346141 MYRFLQ96LU7 910 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 SLC46A2Q9BY10 475 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 CHRDQ9H2X0 955 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 THG1LQ9NWX6 298 aaKnown RBP12.73□□□□□ -0.37
TUBD1-203ENST00000346141 HPSEQ9Y251 543 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 OTOGLQ3ZCN5 2332 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
TUBD1-203ENST00000346141 NUP210Q8TEM1 1887 aaPredicted RBP12.73□□□□□ -0.37
TUBD1-203ENST00000346141 A0A1B0GVL5 298 aa12.72□□□□□ -0.37
TUBD1-203ENST00000346141 MYBPHLA2RUH7 354 aa12.72□□□□□ -0.37
TUBD1-203ENST00000346141 TACC1O75410 805 aa12.72□□□□□ -0.37
TUBD1-203ENST00000346141 STAU1O95793 577 aaKnown RBP12.72□□□□□ -0.37
TUBD1-203ENST00000346141 AP3M2P53677 418 aa12.72□□□□□ -0.37
TUBD1-203ENST00000346141 CSTF1Q05048 431 aaKnown RBP12.72□□□□□ -0.37
TUBD1-203ENST00000346141 STK4Q13043 487 aa12.72□□□□□ -0.37
TUBD1-203ENST00000346141 TRPC3Q13507 836 aa12.72□□□□□ -0.37
TUBD1-203ENST00000346141 VSTM1Q6UX27 236 aa12.72□□□□□ -0.37
TUBD1-203ENST00000346141 MON1AQ86VX9 555 aa12.72□□□□□ -0.37
TUBD1-203ENST00000346141 RALGPS2Q86X27 583 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms