RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 TAF4BQ92750 862 aa21.43■■□□□ 1.02
CEACAM3-201ENST00000344550 SPATA17Q96L03 361 aa21.43■■□□□ 1.02
CEACAM3-201ENST00000344550 XYLT2Q9H1B5 865 aa21.43■■□□□ 1.02
CEACAM3-201ENST00000344550 SNX25Q9H3E2 840 aa21.43■■□□□ 1.02
CEACAM3-201ENST00000344550 SEMA4AQ9H3S1 761 aa21.43■■□□□ 1.02
CEACAM3-201ENST00000344550 LTB4R2Q9NPC1 389 aa21.43■■□□□ 1.02
CEACAM3-201ENST00000344550 MAGEC2Q9UBF1 373 aaPredicted RBP21.43■■□□□ 1.02
CEACAM3-201ENST00000344550 MYBPHLA2RUH7 354 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 FAM170BA6NMN3 283 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 ACAT1P24752 427 aaKnown RBP21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 CYP2F1P24903 491 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 MAMSTRQ6ZN01 415 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 TPRG1Q6ZUI0 275 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 GIPC2Q8TF65 315 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 MRPS31Q92665 395 aaKnown RBP21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 CHAMP1Q96JM3 812 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 FAM84AQ96KN4 292 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 C8orf33Q9H7E9 229 aaPredicted RBP21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 KIF9Q9HAQ2 790 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 RMND1Q9NWS8 449 aa21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 THG1LQ9NWX6 298 aaKnown RBP21.42■■□□□ 1.02
CEACAM3-201ENST00000344550 F5P12259 2224 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 ARNTLO00327 626 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 C4BPAP04003 597 aaKnown RBP21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 P4HA1P13674 534 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 PFKLP17858 780 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 LMO2P25791 158 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 MCCD1P59942 119 aaPredicted RBP21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 GRM2Q14416 872 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 SGSM1Q2NKQ1 1148 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 MON1AQ86VX9 555 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 C1orf210Q8IVY1 113 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 CMTM8Q8IZV2 173 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 CELF5Q8N6W0 485 aaKnown RBP21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 FOXQ1Q9C009 403 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 GOLPH3LQ9H4A5 285 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 HEBP1Q9NRV9 189 aa21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 HOOK1Q9UJC3 728 aaKnown RBP21.41■■□□□ 1.02
CEACAM3-201ENST00000344550 LRRIQ3A6PVS8 624 aaPredicted RBP21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 DCNP07585 359 aaKnown RBP21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 MYL6P60660 151 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 BIRC3Q13489 604 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 NCOA4Q13772 614 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 ZNF268Q14587 947 aaPredicted RBP21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 UBXN2BQ14CS0 331 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 ZACNQ401N2 412 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 INTS8Q75QN2 995 aaKnown RBP21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 TMEM150AQ86TG1 271 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 ELOA2Q8IYF1 753 aaPredicted RBP21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 FMR1NBQ8N0W7 255 aaPredicted RBP21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 BPIFB1Q8TDL5 484 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 CSGALNACT1Q8TDX6 532 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 TIGD1Q96MW7 591 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 GSDMAQ96QA5 445 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 SLC46A2Q9BY10 475 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 CRTAC1Q9NQ79 661 aa21.4■■□□□ 1.02
CEACAM3-201ENST00000344550 SLC38A8A6NNN8 435 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 TRIM66O15016 1216 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 AVPR1AP37288 418 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 PPP3CCP48454 512 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 PDE6CP51160 858 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 DDR2Q16832 855 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 ZNF699Q32M78 642 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 EDRF1Q3B7T1 1238 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 ZNF528Q3MIS6 628 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 COBLL1Q53SF7 1204 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 ZNF667Q5HYK9 610 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 STXBP5Q5T5C0 1151 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 TDRD10Q5VZ19 366 aaKnown RBP21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 OR6B3Q8NGW1 331 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 PLEKHO2Q8TD55 490 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 C8orf48Q96LL4 319 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 FBXO4Q9UKT5 387 aa21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 NUP210Q8TEM1 1887 aaPredicted RBP21.39■■□□□ 1.01
CEACAM3-201ENST00000344550 PDGFRBP09619 1106 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 PRR29P0C7W0 189 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 PTPN1P18031 435 aaKnown RBP21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 NR2F2P24468 414 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 FAM160A1Q05DH4 1040 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 CEP135Q66GS9 1140 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 ZC3H14Q6PJT7 736 aaKnown RBP21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 RALGPS2Q86X27 583 aaPredicted RBP21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 ZNF687Q8N1G0 1237 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 MYLPFQ96A32 169 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 RSPRY1Q96DX4 576 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 PCED1BQ96HM7 432 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 TNIP3Q96KP6 325 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 MRPL45Q9BRJ2 306 aaKnown RBP21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 ELOVL4Q9GZR5 314 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 GDPD2Q9HCC8 539 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 TDP1Q9NUW8 608 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 PIAS3Q9Y6X2 628 aa21.38■■□□□ 1.01
CEACAM3-201ENST00000344550 SHISA7A6NL88 538 aa21.37■■□□□ 1.01
CEACAM3-201ENST00000344550 A8MXQ7 604 aa21.37■■□□□ 1.01
CEACAM3-201ENST00000344550 ATP2C2O75185 946 aa21.37■■□□□ 1.01
CEACAM3-201ENST00000344550 SMC2O95347 1197 aa21.37■■□□□ 1.01
CEACAM3-201ENST00000344550 TARSP26639 723 aaKnown RBP21.37■■□□□ 1.01
CEACAM3-201ENST00000344550 ANXA13P27216 316 aa21.37■■□□□ 1.01
CEACAM3-201ENST00000344550 GTF2H1P32780 548 aa21.37■■□□□ 1.01
CEACAM3-201ENST00000344550 PSMC2P35998 433 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms