RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CACNA2D4Q7Z3S7 1137 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 MON1AQ86VX9 555 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 PDCL2Q8N4E4 241 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 C12orf50Q8NA57 414 aaPredicted RBP16.81■□□□□ 0.28
LINC01116-202ENST00000339037 STKLD1Q8NE28 680 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 LEO1Q8WVC0 666 aaPredicted RBP16.81■□□□□ 0.28
LINC01116-202ENST00000339037 EPSTI1Q96J88 318 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 LOXL4Q96JB6 756 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 ARRDC1-AS1Q9H2J1 176 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 ABCB6Q9NP58 842 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 SEL1LQ9UBV2 794 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 STK17AQ9UEE5 414 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 EXOC7Q9UPT5 735 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 KIF26AQ9ULI4 1882 aaPredicted RBP16.8■□□□□ 0.28
LINC01116-202ENST00000339037 SPAG17Q6Q759 2223 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 AXIN1O15169 862 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 HUS1O60921 280 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 RNF40O75150 1001 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 KRT37O76014 449 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 ITGB3P05106 788 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 C7P10643 843 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 ARSAP15289 507 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 RPL10AP62906 217 aaKnown RBP16.8■□□□□ 0.28
LINC01116-202ENST00000339037 KCNA1Q09470 495 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 CUL4AQ13619 759 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 ZNF268Q14587 947 aaPredicted RBP16.8■□□□□ 0.28
LINC01116-202ENST00000339037 PDGFRLQ15198 375 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 SF3A2Q15428 464 aaKnown RBP16.8■□□□□ 0.28
LINC01116-202ENST00000339037 SDHAF4Q5VUM1 108 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 USP49Q70CQ1 688 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 BRSK2Q8IWQ3 736 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 RIN3Q8TB24 985 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 SAAL1Q96ER3 474 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 ACBD6Q9BR61 282 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 STRA6Q9BX79 667 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 RBAKQ9NYW8 714 aaPredicted RBP16.8■□□□□ 0.28
LINC01116-202ENST00000339037 UXTQ9UBK9 157 aaPredicted RBP16.8■□□□□ 0.28
LINC01116-202ENST00000339037 L1RE1Q9UN81 338 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 AGAP1Q9UPQ3 857 aa16.8■□□□□ 0.28
LINC01116-202ENST00000339037 AKAP3O75969 853 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 EPN2O95208 641 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 EGFP01133 1207 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 GAP43P17677 238 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 DRD1P21728 446 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 ACAT1P24752 427 aaKnown RBP16.79■□□□□ 0.28
LINC01116-202ENST00000339037 CYP2F1P24903 491 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 RAP1GAPP47736 663 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 WNT7BP56706 349 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 MYL7Q01449 175 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 CCDC6Q16204 474 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 DDR2Q16832 855 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 INTS6LQ5JSJ4 861 aaKnown RBP16.79■□□□□ 0.28
LINC01116-202ENST00000339037 L1TD1Q5T7N2 865 aaKnown RBP16.79■□□□□ 0.28
LINC01116-202ENST00000339037 TMEM92Q6UXU6 159 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 KBTBD6Q86V97 674 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 TMEM86AQ8N2M4 240 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 CPA6Q8N4T0 437 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 LRRC52Q8N7C0 313 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 C1orf127Q8N9H9 656 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 TTC16Q8NEE8 873 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 EXOC4Q96A65 974 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 TRMT2BQ96GJ1 504 aaKnown RBP16.79■□□□□ 0.28
LINC01116-202ENST00000339037 ACCSQ96QU6 501 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 P2RY13Q9BPV8 354 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 TRPC7Q9HCX4 862 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 DDX43Q9NXZ2 648 aaKnown RBP16.79■□□□□ 0.28
LINC01116-202ENST00000339037 TBC1D7Q9P0N9 293 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 CCDC39Q9UFE4 941 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 METRNQ9UJH8 293 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 ZZEF1O43149 2961 aa16.79■□□□□ 0.28
LINC01116-202ENST00000339037 VPS37CA5D8V6 355 aaPredicted RBP16.78■□□□□ 0.28
LINC01116-202ENST00000339037 TADA3O75528 432 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 NOL4O94818 638 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 GCNT3O95395 438 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 CKMP06732 381 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 ZNF806P0C7X5 589 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 TXLNAP40222 546 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 LIMK1P53667 647 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 FAM160A1Q05DH4 1040 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 MTF1Q14872 753 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 FBXO43Q4G163 708 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 PLPP6Q8IY26 295 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 CAMKK1Q8N5S9 505 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 CACTINQ8WUQ7 758 aaKnown RBP16.78■□□□□ 0.28
LINC01116-202ENST00000339037 MYRFLQ96LU7 910 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 TMEM206Q9H813 350 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 FBRSL1Q9HCM7 1045 aaKnown RBP16.78■□□□□ 0.28
LINC01116-202ENST00000339037 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 ASPMQ8IZT6 3477 aa16.78■□□□□ 0.28
LINC01116-202ENST00000339037 TRAV19A0A0A6YYK7 116 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 MYMKA6NI61 221 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 LDHAP00338 332 aaKnown RBP16.77■□□□□ 0.28
LINC01116-202ENST00000339037 GARTP22102 1010 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 PCSK1P29120 753 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 GJA4P35212 333 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 GALK1P51570 392 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 ST3GAL2Q16842 350 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 CFAP221Q4G0U5 840 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 RRAGBQ5VZM2 374 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 NAIF1Q69YI7 327 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms