RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 IPPQ9Y573 584 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 CXCL8P10145 99 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 FGFR1P11362 822 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 P4HA1P13674 534 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 XRCC4Q13426 336 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 LONRF2Q1L5Z9 754 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 PTPN20Q4JDL3 420 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 MANEALQ5VSG8 457 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 STRADAQ7RTN6 431 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 HOOK3Q86VS8 718 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 RHPN2Q8IUC4 686 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF296Q8WUU4 475 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF560Q96MR9 790 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 TWNKQ96RR1 684 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 MCMBPQ9BTE3 642 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 GGA2Q9UJY4 613 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 GABRQQ9UN88 632 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 SCN5AQ14524 2016 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 SMIM28A0A1B0GU29 152 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 EIF3HO15372 352 aaKnown RBP eCLIP5.68□□□□□ -1.55e-7■■□□□ 13.1
PRPF4B-201ENST00000337659 SART1O43290 800 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 DAB1O75553 588 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 MAGEA11P43364 429 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ACOT2P49753 483 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ADCY1Q08828 1119 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 LPIN1Q14693 890 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ARHGEF6Q15052 776 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 DPYSL2Q16555 572 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 INTS6LQ5JSJ4 861 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 MSANTD2Q6P1R3 559 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 TTC27Q6P3X3 843 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 LRRC71Q8N4P6 559 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 TRAPPC12Q8WVT3 735 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 DDX23Q9BUQ8 820 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 NUP85Q9BW27 656 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 SSU72Q9NP77 194 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 FAM114A2Q9NRY5 505 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 RRN3Q9NYV6 651 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 CPA4Q9UI42 421 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 hCG_1818297A0A087WSY0 165 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 GFRA2O00451 464 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF185O15231 689 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 URI1O94763 535 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 OAZ2O95190 189 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 MYBL2P10244 700 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 COMTP21964 271 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 GRIK3Q13003 919 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 PDCLQ13371 301 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 SV2CQ496J9 727 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 PLEKHG4Q58EX7 1191 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 BBS12Q6ZW61 710 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 FAM126BQ8IXS8 530 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF683Q8IZ20 524 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ANKRD52Q8NB46 1076 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 TMEM35BQ8NCS4 154 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ZSCAN18Q8TBC5 510 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 CCHCR1Q8TD31 782 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 U2AF1L4Q8WU68 220 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 RNPC3Q96LT9 517 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 SELENOOQ9BVL4 669 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 DCLK3Q9C098 648 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 PKD2L1Q9P0L9 805 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 GOLGA8IPA6NC78 632 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 GOLGA8JA6NMD2 632 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 TREHO43280 583 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 XPOTO43592 962 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 MICAL2O94851 1124 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 IGLV3-27P01718 113 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 LINC00271P0C7V0 271 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 IL4RP24394 825 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ACADSBP45954 432 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 UAP1Q16222 522 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF699Q32M78 642 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 HIBCHQ6NVY1 386 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ANKS1BQ7Z6G8 1248 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 CASKIN2Q8WXE0 1202 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 CENPTQ96BT3 561 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF689Q96CS4 500 aaPredicted RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 ZIC5Q96T25 663 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 EIF2AQ9BY44 585 aaKnown RBP5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 AAASQ9NRG9 546 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 OSER1Q9NX31 292 aa5.68□□□□□ -1.5
PRPF4B-201ENST00000337659 TNFRSF10BO14763 440 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 SPTLC1O15269 473 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 ZDHHC11BP0C7U3 371 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 TNNC1P63316 161 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 SOX4Q06945 474 aaPredicted RBP5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 MBTPS1Q14703 1052 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 MAP9Q49MG5 647 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 PPP1R26Q5T8A7 1209 aaPredicted RBP5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 AGBL2Q5U5Z8 902 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 AGMOQ6ZNB7 445 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 HDXQ7Z353 690 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 DPP9Q86TI2 863 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 TTC30AQ86WT1 665 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 RHOT1Q8IXI2 618 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 C2orf15Q8WU43 125 aaKnown RBP5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 UBXN4Q92575 508 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 GLG1Q92896 1179 aa5.67□□□□□ -1.5
PRPF4B-201ENST00000337659 CYFIP2Q96F07 1278 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms