RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 KRT17Q04695 432 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 CLEC16AQ2KHT3 1053 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 PKDCCQ504Y2 493 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 TTC30AQ86WT1 665 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 WDTC1Q8N5D0 677 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 MYLPFQ96A32 169 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 HNRNPABQ99729 332 aaKnown RBP22.82■■□□□ 1.24
TPM1-204ENST00000334895 ALG13Q9NP73 1137 aaKnown RBP22.82■■□□□ 1.24
TPM1-204ENST00000334895 PTPRDP23468 1912 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 OR6C75A6NL08 312 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 H7C4K7 107 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 CLDN5O00501 218 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 C2CD2LO14523 706 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 ADAM12O43184 909 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 ADORA2BP29275 332 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 ERVK-21P61565 698 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 NOMO3P69849 1222 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 TSPY1Q01534 308 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 STILQ15468 1287 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 RAB30Q15771 203 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 PSMD5Q16401 504 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 KIAA1841Q6NSI8 718 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 AUTS2Q8WXX7 1259 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 DNAI2Q9GZS0 605 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 NKX2-4Q9H2Z4 354 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 MSRAQ9UJ68 235 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 BACE2Q9Y5Z0 518 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 ADGRG1Q9Y653 693 aa22.81■■□□□ 1.24
TPM1-204ENST00000334895 M0QYV0 167 aa22.8■■□□□ 1.24
TPM1-204ENST00000334895 RPL17P18621 184 aaKnown RBP22.8■■□□□ 1.24
TPM1-204ENST00000334895 CDH5P33151 784 aaPredicted RBP22.8■■□□□ 1.24
TPM1-204ENST00000334895 ALKBH5Q6P6C2 394 aaKnown RBP22.8■■□□□ 1.24
TPM1-204ENST00000334895 TRIM72Q6ZMU5 477 aa22.8■■□□□ 1.24
TPM1-204ENST00000334895 UBA3Q8TBC4 463 aa22.8■■□□□ 1.24
TPM1-204ENST00000334895 SPPL3Q8TCT6 385 aa22.8■■□□□ 1.24
TPM1-204ENST00000334895 TGS1Q96RS0 853 aaKnown RBP22.8■■□□□ 1.24
TPM1-204ENST00000334895 ZNF518BQ9C0D4 1074 aa22.8■■□□□ 1.24
TPM1-204ENST00000334895 LHX5Q9H2C1 402 aa22.8■■□□□ 1.24
TPM1-204ENST00000334895 PDCL3Q9H2J4 239 aa22.8■■□□□ 1.24
TPM1-204ENST00000334895 CYTH4Q9UIA0 394 aa22.8■■□□□ 1.24
TPM1-204ENST00000334895 TMCO5BA8MYB1 307 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 LILRB3O75022 631 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 URODP06132 367 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 DNAJB1P25685 340 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 SLC39A12Q504Y0 691 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 CCDC122Q5T0U0 273 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 NAA35Q5VZE5 725 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 C1orf131Q8NDD1 294 aaKnown RBP22.79■■□□□ 1.24
TPM1-204ENST00000334895 TIFAQ96CG3 184 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 CLSTN3Q9BQT9 956 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 RHOBTB2Q9BYZ6 727 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 LZTS1Q9Y250 596 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 CDY1Q9Y6F8 540 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 A0A0U1RQJ8 604 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 LSM8O95777 96 aaKnown RBP22.79■■□□□ 1.24
TPM1-204ENST00000334895 RB1P06400 928 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 CTSAP10619 480 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 GZMAP12544 262 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 GPD2P43304 727 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 PTPN14Q15678 1187 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 SLC8B1Q6J4K2 584 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 FAM35AQ86V20 835 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 ANKRD52Q8NB46 1076 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 FBXO22Q8NEZ5 403 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 ATRIPQ8WXE1 791 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 CPA5Q8WXQ8 436 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 PACSIN1Q9BY11 444 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 OXCT2Q9BYC2 517 aaPredicted RBP22.79■■□□□ 1.24
TPM1-204ENST00000334895 TMEM30AQ9NV96 361 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 STK39Q9UEW8 545 aa22.79■■□□□ 1.24
TPM1-204ENST00000334895 TULP2O00295 520 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 VNN2O95498 520 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 CACNA2D1P54289 1103 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 ERVFC1P60507 584 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 CENPCQ03188 943 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 GPR65Q8IYL9 337 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 DCP1BQ8IZD4 617 aaKnown RBP22.78■■□□□ 1.24
TPM1-204ENST00000334895 SECISBP2LQ93073 1101 aaKnown RBP22.78■■□□□ 1.24
TPM1-204ENST00000334895 SAMD11Q96NU1 681 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 ISCUQ9H1K1 167 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 TFR2Q9UP52 801 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 ZKSCAN5Q9Y2L8 839 aa22.78■■□□□ 1.24
TPM1-204ENST00000334895 GRM6O15303 877 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 BEST1O76090 585 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 ARPP19P56211 112 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 GPR17Q13304 367 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 CAMK1Q14012 370 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 SPA17Q15506 151 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 MAPRE1Q15691 268 aaKnown RBP22.77■■□□□ 1.24
TPM1-204ENST00000334895 ACAD10Q6JQN1 1059 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 TMEM35BQ8NCS4 154 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 POF1BQ8WVV4 589 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 MED10Q9BTT4 135 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 C11orf84Q9BUA3 381 aaPredicted RBP22.77■■□□□ 1.24
TPM1-204ENST00000334895 CERS4Q9HA82 394 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 MRPL17Q9NRX2 175 aaKnown RBP22.77■■□□□ 1.24
TPM1-204ENST00000334895 KRT82Q9NSB4 513 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 HESX1Q9UBX0 185 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 PCDHA13Q9Y5I0 950 aa22.77■■□□□ 1.24
TPM1-204ENST00000334895 COL4A4P53420 1690 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms