RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 AUHQ13825 339 aaKnown RBP18.32■□□□□ 0.52
DDX28-201ENST00000332395 ZNF268Q14587 947 aaPredicted RBP18.32■□□□□ 0.52
DDX28-201ENST00000332395 TNFAIP8L3Q5GJ75 292 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 MFSD5Q6N075 450 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 B4GALNT4Q76KP1 1039 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 NT5DC4Q86YG4 428 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 ARFGAP1Q8N6T3 406 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 EMC1Q8N766 993 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 MDM1Q8TC05 714 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 HEXIM2Q96MH2 286 aaKnown RBP18.32■□□□□ 0.52
DDX28-201ENST00000332395 BARX2Q9UMQ3 279 aaPredicted RBP18.32■□□□□ 0.52
DDX28-201ENST00000332395 KAT6AQ92794 2004 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 ADCY6O43306 1168 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 HMGCRP04035 888 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 VDRP11473 427 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 GRM5P41594 1212 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 INCA1Q0VD86 236 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 CNGA2Q16280 664 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 KIZQ2M2Z5 673 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 SMTNL2Q2TAL5 461 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 P3H1Q32P28 736 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 PLEKHH3Q7Z736 793 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 ALLCQ8N6M5 410 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 GLIS1Q8NBF1 620 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 CCHCR1Q8TD31 782 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 HAUS1Q96CS2 278 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 KIF12Q96FN5 646 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 PARK7Q99497 189 aaKnown RBP18.32■□□□□ 0.52
DDX28-201ENST00000332395 ZWILCHQ9H900 591 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 C3orf70A6NLC5 250 aaPredicted RBP18.31■□□□□ 0.52
DDX28-201ENST00000332395 STAU1O95793 577 aaKnown RBP18.31■□□□□ 0.52
DDX28-201ENST00000332395 KRT7P08729 469 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 IL1R2P27930 398 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 GPD2P43304 727 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 GABRB2P47870 512 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 NDST1P52848 882 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 KYNUQ16719 465 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 HADHQ16836 314 aaKnown RBP18.31■□□□□ 0.52
DDX28-201ENST00000332395 LONRF1Q17RB8 773 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 FAM110CQ1W6H9 321 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 HIBCHQ6NVY1 386 aaPredicted RBP18.31■□□□□ 0.52
DDX28-201ENST00000332395 NPLOC4Q8TAT6 608 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 KAT2BQ92831 832 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 NCAPGQ9BPX3 1015 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 SELENOSQ9BQE4 189 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 ADAM7Q9H2U9 754 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 VCPP55072 806 aaKnown RBP18.31■□□□□ 0.52
DDX28-201ENST00000332395 OASLQ15646 514 aaKnown RBP18.31■□□□□ 0.52
DDX28-201ENST00000332395 DCAF4L1Q3SXM0 396 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 KCNT1Q5JUK3 1230 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 IQSEC1Q6DN90 963 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 DPH6Q7L8W6 267 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 CENPTQ96BT3 561 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 MCRS1Q96EZ8 462 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 NINJ2Q9NZG7 142 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 GINS2Q9Y248 185 aa18.31■□□□□ 0.52
DDX28-201ENST00000332395 DRG1Q9Y295 367 aaKnown RBP18.31■□□□□ 0.52
DDX28-201ENST00000332395 CHN1P15882 459 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 LIG3P49916 1009 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 TMEM62Q0P6H9 643 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 UBA3Q8TBC4 463 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
DDX28-201ENST00000332395 PTPN18Q99952 460 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 FAM124BQ9H5Z6 455 aaPredicted RBP18.3■□□□□ 0.52
DDX28-201ENST00000332395 GBA2Q9HCG7 927 aaPredicted RBP18.3■□□□□ 0.52
DDX28-201ENST00000332395 NPTXRO95502 500 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 ZSCAN5DPP0CG00 497 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 ARSEP51690 589 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 FKBP1BP68106 108 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 RELL1Q8IUW5 271 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 ZCCHC9Q8N567 271 aaKnown RBP18.3■□□□□ 0.52
DDX28-201ENST00000332395 TTC39CQ8N584 583 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 SERPINB12Q96P63 405 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 XPO6Q96QU8 1125 aaKnown RBP18.3■□□□□ 0.52
DDX28-201ENST00000332395 FAM49AQ9H0Q0 323 aaPredicted RBP18.3■□□□□ 0.52
DDX28-201ENST00000332395 ADAMTS10Q9H324 1103 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 EFR3BQ9Y2G0 817 aa18.3■□□□□ 0.52
DDX28-201ENST00000332395 RRN3P2A6NIE6 340 aa18.29■□□□□ 0.52
DDX28-201ENST00000332395 DNALI1O14645 258 aaPredicted RBP18.29■□□□□ 0.52
DDX28-201ENST00000332395 ITGAVP06756 1048 aa18.29■□□□□ 0.52
DDX28-201ENST00000332395 ETS1P14921 441 aa18.29■□□□□ 0.52
DDX28-201ENST00000332395 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
DDX28-201ENST00000332395 ERMARDQ5T6L9 678 aa18.29■□□□□ 0.52
DDX28-201ENST00000332395 SPRYD7Q5W111 196 aa18.29■□□□□ 0.52
DDX28-201ENST00000332395 SPATS2Q86XZ4 545 aaKnown RBP18.29■□□□□ 0.52
DDX28-201ENST00000332395 NT5C1AQ9BXI3 368 aa18.29■□□□□ 0.52
DDX28-201ENST00000332395 FOXP3Q9BZS1 431 aa18.29■□□□□ 0.52
DDX28-201ENST00000332395 CXCL16Q9H2A7 254 aa18.29■□□□□ 0.52
DDX28-201ENST00000332395 CYP3A5P20815 502 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 MYO1EQ12965 1108 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 FAM102AQ5T9C2 384 aaPredicted RBP18.28■□□□□ 0.52
DDX28-201ENST00000332395 TAOK1Q7L7X3 1001 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 SLC35B2Q8TB61 432 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 RBM15Q96T37 977 aaKnown RBP eCLIP18.28■□□□□ 0.529e-7■■■■□ 22.2
DDX28-201ENST00000332395 MYCBPQ99417 103 aaPredicted RBP18.28■□□□□ 0.52
DDX28-201ENST00000332395 SNTG2Q9NY99 539 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 TSPAN16Q9UKR8 245 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 KIAA1257Q9ULG3 409 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 KDELR1P24390 212 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms