RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 LGR5O75473 907 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 TOM1L1O75674 476 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 NPTXRO95502 500 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 ZSCAN5DPP0CG00 497 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 HSPA6P17066 643 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 SP100P23497 879 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 STX2P32856 288 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 IREB2P48200 963 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 MTFR1Q15390 333 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 TARBP2Q15633 366 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 KYNUQ16719 465 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 KCNT1Q5JUK3 1230 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 FOXB2Q5VYV0 432 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 ZBTB8OSQ8IWT0 167 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 GALNT15Q8N3T1 639 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 FBF1Q8TES7 1133 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 SLC7A6OSQ96CW6 309 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 DDX27Q96GQ7 796 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 GPR20Q99678 358 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 TBC1D10AQ9BXI6 508 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 ROPN1BQ9BZX4 212 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 ROPN1Q9HAT0 212 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 ZC3H11AO75152 810 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 SKIV2L2P42285 1042 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 ITGA8P53708 1063 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 ZNF699Q32M78 642 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 WDR72Q3MJ13 1102 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 VSIG1Q86XK7 387 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 TFAP2BQ92481 460 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 CPB2Q96IY4 423 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 RAB3IPQ96QF0 476 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 MMP19Q99542 508 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 LTBP3Q9NS15 1303 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 PROSCO94903 275 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 IFNB1P01574 187 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 CYP1A1P04798 512 aaPredicted RBP16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 ETS1P14921 441 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 NOL9Q5SY16 702 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 CYP4F22Q6NT55 531 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 ZNF449Q6P9G9 518 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 CROCCP2Q86T23 111 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 C9orf72Q96LT7 481 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 SGIP1Q9BQI5 828 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 OSBPL8Q9BZF1 889 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 LRMDAQ9H2I8 198 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 DENND2DQ9H6A0 471 aaPredicted RBP16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 IVNS1ABPQ9Y6Y0 642 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 CBX6O95503 412 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 VTNP04004 478 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 IQCF3P0C7M6 154 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 MRPS35P82673 323 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 DUOXA2Q1HG44 320 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 PARP6Q2NL67 630 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 ZNF365Q70YC5 407 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 LMNTD2Q8IXW0 634 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 OPTNQ96CV9 577 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 ACO2Q99798 780 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 PITPNM3Q9BZ71 974 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 ZWILCHQ9H900 591 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.35■□□□□ 0.216e-6■■□□□ 12.8
SHROOM1-201ENST00000319854 WDR35Q9P2L0 1181 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 STYXL1Q9Y6J8 313 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 ADGRA2Q96PE1 1338 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
SHROOM1-201ENST00000319854 ZNF286BP0CG31 522 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 SRRM1Q8IYB3 904 aaKnown RBP16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 EMC1Q8N766 993 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 GLIS1Q8NBF1 620 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 SERPINB12Q96P63 405 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 PAIP2Q9BPZ3 127 aaKnown RBP16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 SLCO1B3Q9NPD5 702 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 IGKV6D-21A0A0A0MT36 114 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 SMAPO00193 183 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 FSCN2O14926 492 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 KRT1P04264 644 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 ATF2P15336 505 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 GCLCP48506 637 aaPredicted RBP16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 SESN3P58005 492 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 CLDN10P78369 228 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 TBC1D25Q3MII6 688 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 OR52E8Q6IFG1 317 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 DNAJC24Q6P3W2 148 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 BRSK2Q8IWQ3 736 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 MORC4Q8TE76 937 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 DNAJC9Q8WXX5 260 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 EVPLQ92817 2033 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 WDR4P57081 412 aaKnown RBP16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 KLC1Q07866 573 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 ATF7IP2Q5U623 682 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 MTHFD1LQ6UB35 978 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 RHOT1Q8IXI2 618 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 FAM136AQ96C01 138 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 MAGEB18Q96M61 343 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 ANKRD27Q96NW4 1050 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms