RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 DDX53Q86TM3 631 aaKnown RBP17.09■□□□□ 0.33
TUBB3-201ENST00000315491 DNAAF5Q86Y56 855 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 MYCBPAPQ8TBZ2 947 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 SLC2A14Q8TDB8 520 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 IPO4Q8TEX9 1081 aaKnown RBP17.09■□□□□ 0.33
TUBB3-201ENST00000315491 PKMYT1Q99640 499 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 HNRNPABQ99729 332 aaKnown RBP17.09■□□□□ 0.33
TUBB3-201ENST00000315491 ZNF518BQ9C0D4 1074 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 ISCUQ9H1K1 167 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 CHST7Q9NS84 486 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 KCND1Q9NSA2 647 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
TUBB3-201ENST00000315491 HESX1Q9UBX0 185 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 GTF3C4Q9UKN8 822 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 FAM170AA1A519 330 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 OR6C75A6NL08 312 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 CCP110O43303 1012 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 FGF18O76093 207 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 FTLP02792 175 aaPredicted RBP17.08■□□□□ 0.33
TUBB3-201ENST00000315491 H2AFZP0C0S5 128 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 PLCB3Q01970 1234 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 KRT17Q04695 432 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 KIAA1841Q6NSI8 718 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 PPP1R2P3Q6NXS1 205 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 H2AFVQ71UI9 128 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 TXLNBQ8N3L3 684 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 WDTC1Q8N5D0 677 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 C1orf131Q8NDD1 294 aaKnown RBP17.08■□□□□ 0.33
TUBB3-201ENST00000315491 UBA3Q8TBC4 463 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 CPA5Q8WXQ8 436 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 PCED1BQ96HM7 432 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 MED10Q9BTT4 135 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 PACSIN1Q9BY11 444 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 B3GNT5Q9BYG0 378 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 ZCWPW1Q9H0M4 648 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 RWDD3Q9Y3V2 267 aa17.08■□□□□ 0.33
TUBB3-201ENST00000315491 KIAA1671Q9BY89 1806 aa17.08■□□□□ 0.32
TUBB3-201ENST00000315491 USP27XA6NNY8 438 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 MYOGP15173 224 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 CTNNB1P35222 781 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 BMPR1AP36894 532 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 NSFP46459 744 aaKnown RBP17.07■□□□□ 0.32
TUBB3-201ENST00000315491 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
TUBB3-201ENST00000315491 PKDCCQ504Y2 493 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 LRRTM3Q86VH5 581 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 TTC30AQ86WT1 665 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 REXO1L1PQ8IX06 675 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 DCP1BQ8IZD4 617 aaKnown RBP17.07■□□□□ 0.32
TUBB3-201ENST00000315491 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 ANKRD52Q8NB46 1076 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 RIN2Q8WYP3 895 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-201ENST00000315491 PIK3R5Q8WYR1 880 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 MYLPFQ96A32 169 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 OXCT2Q9BYC2 517 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-201ENST00000315491 TMLHEQ9NVH6 421 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 STK39Q9UEW8 545 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 INTUQ9ULD6 942 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 TFR2Q9UP52 801 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 ATP8B3O60423 1300 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 VWA8A3KMH1 1905 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 A0A0U1RQJ8 604 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 RCCD1A6NED2 376 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 CLDN5O00501 218 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 TBC1D4O60343 1298 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 OR4Q2P0C623 313 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 GPD2P43304 727 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 GLUD2P49448 558 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 GALCP54803 685 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 DSG1Q02413 1049 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-201ENST00000315491 PAQR9Q6ZVX9 377 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 KLHL23Q8NBE8 558 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 ATRIPQ8WXE1 791 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 SECISBP2LQ93073 1101 aaKnown RBP17.07■□□□□ 0.32
TUBB3-201ENST00000315491 PPP1R13BQ96KQ4 1090 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 MTRRQ9UBK8 725 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 PCDHA11Q9Y5I1 949 aa17.07■□□□□ 0.32
TUBB3-201ENST00000315491 ANKRD62A6NC57 917 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 PJA2O43164 708 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 SETSIPP0DME0 302 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 RGS19P49795 217 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 BCAT1P54687 386 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 BST2Q10589 180 aaKnown RBP17.06■□□□□ 0.32
TUBB3-201ENST00000315491 KIF5AQ12840 1032 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 PSMD5Q16401 504 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 ZNF662Q6ZS27 426 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 FAM35AQ86V20 835 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 PHF13Q86YI8 300 aaPredicted RBP17.06■□□□□ 0.32
TUBB3-201ENST00000315491 VPS52Q8N1B4 723 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 LACRTQ9GZZ8 138 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 BACE2Q9Y5Z0 518 aa17.06■□□□□ 0.32
TUBB3-201ENST00000315491 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-201ENST00000315491 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-201ENST00000315491 ARHGEF15O94989 841 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 URODP06132 367 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 CA3P07451 260 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 TMEM253P0C7T8 217 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 ABCB4P21439 1286 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms