RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 ACSF2Q96CM8 615 aaPredicted RBP11.74□□□□□ -0.53
TRIM59-201ENST00000309784 TSPAN18Q96SJ8 248 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 NAP1L3Q99457 506 aaPredicted RBP11.74□□□□□ -0.53
TRIM59-201ENST00000309784 HEMGNQ9BXL5 484 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 WNT8AQ9H1J5 351 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 RBM12Q9NTZ6 932 aaKnown RBP11.74□□□□□ -0.53
TRIM59-201ENST00000309784 OGDHLQ9ULD0 1010 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 PCDHGC3Q9UN70 934 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 NT5C1B-RDH14C9J2C7 533 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 NBNO60934 754 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 PCSK1P29120 753 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 GATMP50440 423 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 INCA1Q0VD86 236 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 TIGD5Q53EQ6 642 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 C11orf63Q6NUN7 778 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 CC2D1AQ6P1N0 951 aaPredicted RBP11.74□□□□□ -0.53
TRIM59-201ENST00000309784 TOP6BLQ8N6T0 577 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 TRIM31Q9BZY9 425 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 RGS18Q9NS28 235 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 RNF14Q9UBS8 474 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 MTUS1Q9ULD2 1270 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 CCDC66A2RUB6 948 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 PI4K2BG5E9Z4 385 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 TULP2O00295 520 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 ERLIN1O75477 346 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 STAU1O95793 577 aaKnown RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 PRLRP16471 622 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 PTPN1P18031 435 aaKnown RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 CTNNA2P26232 953 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 RPL9P32969 192 aaKnown RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 TSPY1Q01534 308 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 HLTFQ14527 1009 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 KCTD19Q17RG1 926 aaPredicted RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 OVOS1Q6IE37 1185 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 ZNF280BQ86YH2 543 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 GSTCDQ8NEC7 633 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 IFT81Q8WYA0 676 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 FAXDC2Q96IV6 333 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 WDR35Q9P2L0 1181 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 PRKAG2Q9UGJ0 569 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 LRRD1A4D1F6 860 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 CAPN9O14815 690 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 KRT1P04264 644 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 ERBB2P04626 1255 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 LRPAP1P30533 357 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 PBX3P40426 434 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 LHX1P48742 406 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 BCAT1P54687 386 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 MAP3K7CLP57077 242 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 FAM26DQ5JW98 314 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 LCLAT1Q6UWP7 414 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 OSTM1Q86WC4 334 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 C3orf58Q8NDZ4 430 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 PARD6BQ9BYG5 372 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 DDX47Q9H0S4 455 aaKnown RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 KRT82Q9NSB4 513 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 SQORQ9Y6N5 450 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 ARHGEF37A1IGU5 675 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 C9IYK1 514 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 F8W810 466 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 AP1G2O75843 785 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 PROSCO94903 275 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 PDGFRAP16234 1089 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 RFC1P35251 1148 aaPredicted RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 BST2Q10589 180 aaKnown RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 HADHQ16836 314 aaKnown RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 SMTNL2Q2TAL5 461 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 RTN4RL1Q86UN2 441 aaPredicted RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 SCN4BQ8IWT1 228 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 WDTC1Q8N5D0 677 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
TRIM59-201ENST00000309784 GDAP1L1Q96MZ0 367 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 KANSL3Q9P2N6 904 aa11.73□□□□□ -0.53
TRIM59-201ENST00000309784 F8VP50 259 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 EOMESO95936 686 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 HSPA1AP0DMV8 641 aaKnown RBP11.72□□□□□ -0.53
TRIM59-201ENST00000309784 HSPA1BP0DMV9 641 aaKnown RBP11.72□□□□□ -0.53
TRIM59-201ENST00000309784 DSC3Q14574 896 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 PMF1Q6P1K2 205 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 MRPL10Q7Z7H8 261 aaKnown RBP11.72□□□□□ -0.53
TRIM59-201ENST00000309784 RHOT1Q8IXI2 618 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 C3orf20Q8ND61 904 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 ALG3Q92685 438 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 B3GNT5Q9BYG0 378 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 LHX5Q9H2C1 402 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 TBC1D13Q9NVG8 400 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 GDAP2Q9NXN4 497 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 CYTH4Q9UIA0 394 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 FAM200BP0CF97 657 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 SLC1A1P43005 524 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 GPD2P43304 727 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 RABGGTBP53611 331 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 PLCB3Q01970 1234 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 YWHAHQ04917 246 aaPredicted RBP11.72□□□□□ -0.53
TRIM59-201ENST00000309784 TTC30AQ86WT1 665 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 JOSD2Q8TAC2 188 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 KBTBD7Q8WVZ9 684 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms