RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 GMPRP36959 345 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 RANBP1P43487 201 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 PSMC5P62195 406 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 CRADDP78560 199 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 OTUD4Q01804 1114 aaKnown RBP15.3■□□□□ 0.04
PTPN9-201ENST00000306726 KLC1Q07866 573 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 MAPK6Q16659 721 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 Q4G0T1 1027 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 WLSQ5T9L3 541 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 POLNQ7Z5Q5 900 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 PDIK1LQ8N165 341 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 UBA3Q8TBC4 463 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 BSNDQ8WZ55 320 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 P3H4Q92791 437 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 FAF2Q96CS3 445 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 MXRA8Q9BRK3 442 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 MAF1Q9H063 256 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 SCOCQ9UIL1 159 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 FEM1BQ9UK73 627 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 MYH11P35749 1972 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 WDR64B1ANS9 1081 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 EIF3DO15371 548 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPN9-201ENST00000306726 CIB2O75838 187 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 SH3D19Q5HYK7 790 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 MAP1SQ66K74 1059 aaPredicted RBP15.29■□□□□ 0.04
PTPN9-201ENST00000306726 PAFAH2Q99487 392 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 XPO7Q9UIA9 1087 aaKnown RBP15.29■□□□□ 0.04
PTPN9-201ENST00000306726 MYPNQ86TC9 1320 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 DCTN3O75935 186 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 TCN1P20061 433 aaPredicted RBP15.29■□□□□ 0.04
PTPN9-201ENST00000306726 STAT4Q14765 748 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 GPAT2Q6NUI2 795 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 LRRC71Q8N4P6 559 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 AGO2Q9UKV8 859 aaKnown RBP15.29■□□□□ 0.04
PTPN9-201ENST00000306726 ADSSP30520 456 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 MTFR1Q15390 333 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 TAF5Q15542 800 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 CLUL1Q15846 466 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 C16orf46Q6P387 395 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 GTF3C2Q8WUA4 911 aaPredicted RBP15.29■□□□□ 0.04
PTPN9-201ENST00000306726 SCG3Q8WXD2 468 aaKnown RBP15.29■□□□□ 0.04
PTPN9-201ENST00000306726 SEC14L1Q92503 715 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 FAXDC2Q96IV6 333 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 RAB6BQ9NRW1 208 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 FBXO40Q9UH90 709 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 NCANO14594 1321 aa15.29■□□□□ 0.04
PTPN9-201ENST00000306726 IGLV3-22A0A075B6J6 115 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 COPEO14579 308 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 MMRN1Q13201 1228 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 HYIQ5T013 277 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 SLC30A9Q6PML9 568 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 BTNL9Q6UXG8 535 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 CCHCR1Q8TD31 782 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 SENP7Q9BQF6 1050 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 VCXQ9H320 206 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 MANSC1Q9H8J5 431 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 CES2O00748 559 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 TJP3O95049 919 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 CD48P09326 243 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 ATP4AP20648 1035 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 BACE1P56817 501 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 PTK7Q13308 1070 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 OR5B17Q8NGF7 314 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 TMEM120AQ9BXJ8 343 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 ROPN1BQ9BZX4 212 aaPredicted RBP15.28■□□□□ 0.04
PTPN9-201ENST00000306726 MIS12Q9H081 205 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 ROPN1Q9HAT0 212 aaPredicted RBP15.28■□□□□ 0.04
PTPN9-201ENST00000306726 UVRAGQ9P2Y5 699 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 TRPM7Q96QT4 1865 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 TOMM70O94826 608 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 PSMC1P62191 440 aaKnown RBP15.28■□□□□ 0.04
PTPN9-201ENST00000306726 VGLL4Q14135 290 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 CLEC16AQ2KHT3 1053 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 TKFCQ3LXA3 575 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 CES3Q6UWW8 571 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 FASTKD5Q7L8L6 764 aaKnown RBP15.28■□□□□ 0.04
PTPN9-201ENST00000306726 FAM71AQ8IYT1 594 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 PYDC1Q8WXC3 89 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 PAGR1Q9BTK6 254 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 MTMR12Q9C0I1 747 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 RNPEPL1Q9HAU8 725 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 IFT122Q9HBG6 1241 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 PRM3Q9NNZ6 103 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 C2CD2Q9Y426 696 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 SNCAIPQ9Y6H5 919 aa15.28■□□□□ 0.04
PTPN9-201ENST00000306726 TRIM49D1C9J1S8 452 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 TBX3O15119 743 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 MAP3K7O43318 606 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 GJB1P08034 283 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 GM2AP17900 193 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 ABL2P42684 1182 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 PHKA2P46019 1235 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 PSEN1P49768 467 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 GDF10P55107 478 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 NR1H3Q13133 447 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 KRT81Q14533 505 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 NXNQ6DKJ4 435 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 SDCCAG8Q86SQ7 713 aaPredicted RBP15.27■□□□□ 0.04
PTPN9-201ENST00000306726 SEL1LQ9UBV2 794 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 NOCTQ9UK39 431 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms