RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 CYP2C18P33260 490 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 TM4SF4P48230 202 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 ADCY2Q08462 1091 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 ILF2Q12905 390 aaKnown RBP8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 C10orf120Q5SQS8 335 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 FIBCD1Q8N539 461 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 UBA3Q8TBC4 463 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 ZNF606Q8WXB4 792 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 ZBTB45Q96K62 511 aaPredicted RBP8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 METTL5Q9NRN9 209 aaKnown RBP8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 ALG6Q9Y672 507 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 BAZ2AQ9UIF9 1905 aaKnown RBP8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 RREB1Q92766 1687 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 IQANK1A0A1B0GTG1 560 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 DHX15O43143 795 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 TGFB1I1O43294 461 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 PFKMP08237 780 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 CASP5P51878 434 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 PDE1BQ01064 536 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 ECM1Q16610 540 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 PAN2Q504Q3 1202 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 HERC6Q8IVU3 1022 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 SRRM1Q8IYB3 904 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 ATPAF2Q8N5M1 289 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 PPP4R1Q8TF05 950 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 DCLK3Q9C098 648 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 BRD8Q9H0E9 1235 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 SIK3Q9Y2K2 1263 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 TNRC6CQ9HCJ0 1690 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 ARVCFO00192 962 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 WNT7AO00755 349 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 NCAM2O15394 837 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 ZNF862O60290 1169 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 FGF19O95750 216 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 F2P00734 622 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 ACO1P21399 889 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 CD52P31358 61 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 EIF3EP60228 445 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 MDH1BQ5I0G3 518 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 FAM171A1Q5VUB5 890 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 RAB44Q7Z6P3 723 aaPredicted RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 TPCN2Q8NHX9 752 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 POP1Q99575 1024 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 AP1M1Q9BXS5 423 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 OSBPL8Q9BZF1 889 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 SIK2Q9H0K1 926 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 TRPC7Q9HCX4 862 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 LMCD1Q9NZU5 365 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 PAK5Q9P286 719 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 GTF2IRD1Q9UHL9 959 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 MRFAP1Q9Y605 127 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 ARAP2Q8WZ64 1704 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 ARHGAP42A6NI28 874 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 PROSCO94903 275 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 FGFR4P22455 802 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 FNTAP49354 379 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 KLK7P49862 253 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 SPIRE1Q08AE8 756 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 TBX2Q13207 712 aaPredicted RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 GJB7Q6PEY0 223 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 CCDC137Q6PK04 289 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 C17orf99Q6UX52 265 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 B4GALNT4Q76KP1 1039 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 EPM2AIP1Q7L775 607 aaPredicted RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 ARHGEF26Q96DR7 871 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 FZD8Q9H461 694 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 A0A087X0T9 212 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 GOLGA8QA0A0J9YX86 632 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 GOLGA8OA6NCC3 632 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 GOLGA8NF8WBI6 632 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 CES2O00748 559 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 KRT37O76014 449 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 MMEP08473 750 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 FAM228BP0C875 321 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 COMTP21964 271 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 STIP1P31948 543 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 GEMIN4P57678 1058 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 DHX9Q08211 1270 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 GEN1Q17RS7 908 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 SLC35G1Q2M3R5 365 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 USP41Q3LFD5 358 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 C6orf118Q5T5N4 469 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 RNF187Q5TA31 235 aaPredicted RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 SERPINB11Q96P15 392 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 WDCPQ9H6R7 721 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 MRPL17Q9NRX2 175 aaKnown RBP8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 RNF186Q9NXI6 227 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 TSPAN16Q9UKR8 245 aa8.7□□□□□ -1.02
SNRPD1-201ENST00000300413 SPAG6O75602 509 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 ASS1P00966 412 aaKnown RBP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 KRT14P02533 472 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 ADRB2P07550 413 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 TROVE2P10155 538 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 MLH1P40692 756 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 SCNN1GP51170 649 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 MBTD1Q05BQ5 628 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 TIGD7Q6NT04 549 aaPredicted RBP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 CHSY1Q86X52 802 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 RAB3IL1Q8TBN0 382 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 SHC3Q92529 594 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms