RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 MTERF4Q7Z6M4 381 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 RTN4RL1Q86UN2 441 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 RHOT1Q8IXI2 618 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 STK32AQ8WU08 396 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 RAB21Q9UL25 225 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 GOLGA6L10A0A0M3HER8 536 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 GABRDO14764 452 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 PSTPIP1O43586 416 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 GJB6O95452 261 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 COL6A1P12109 1028 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 MARCKSL1P49006 195 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 BCAT1P54687 386 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 ZNF211Q13398 564 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 BRD3Q15059 726 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 PKDCCQ504Y2 493 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 WSCD1Q658N2 575 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 ANKRD52Q8NB46 1076 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 B3GALNT2Q8NCR0 500 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 URGCPQ8TCY9 931 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 RUBCNQ92622 972 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 CACNG4Q9UBN1 327 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 TDRD15B5MCY1 1934 aaKnown RBP16.58■□□□□ 0.25
HERPUD1-201ENST00000300302 CCDC151A5D8V7 595 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 B3GAT3O94766 335 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 PFKMP08237 780 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 ODC1P11926 461 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 AARSP49588 968 aaKnown RBP eCLIP16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 BST2Q10589 180 aaKnown RBP16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 WDR93Q6P2C0 686 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 ANKRD33Q7Z3H0 272 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 TTC30AQ86WT1 665 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 CPNE8Q86YQ8 564 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 FNIP1Q8TF40 1166 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 SEPT8Q92599 483 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 APBB2Q92870 758 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 ARMC5Q96C12 935 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 MCRS1Q96EZ8 462 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 PNKPQ96T60 521 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 LRRC1Q9BTT6 524 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 KANSL3Q9P2N6 904 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 USTQ9Y2C2 406 aa16.58■□□□□ 0.24
HERPUD1-201ENST00000300302 ARHGEF37A1IGU5 675 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 DCDC2CA8MYV0 355 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 HCRTO43612 131 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 NBNO60934 754 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 ERLIN1O75477 346 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 PARNO95453 639 aaKnown RBP16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 SSR1P43307 286 aaKnown RBP16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 MNX1P50219 401 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 SLC8A3P57103 927 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 PPP2R5EQ16537 467 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 PLEKHG4Q58EX7 1191 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 SLC39A5Q6ZMH5 540 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 OSTM1Q86WC4 334 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 NIPA2Q8N8Q9 360 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 C3orf58Q8NDZ4 430 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 SPATA18Q8TC71 538 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 SLC35F5Q8WV83 523 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 LINC01599Q8WXQ3 324 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 KRT12Q99456 494 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 AP1M1Q9BXS5 423 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 CRISPLD2Q9H0B8 497 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 ELAC1Q9H777 363 aaKnown RBP16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 TMEM161AQ9NX61 479 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 DDX43Q9NXZ2 648 aaKnown RBP16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 TJP2Q9UDY2 1190 aa16.57■□□□□ 0.24
HERPUD1-201ENST00000300302 E5RJQ4 531 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 PYGMP11217 842 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 CCDC130P13994 396 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 PTPN1P18031 435 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 ADORA2BP29275 332 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 RFC1P35251 1148 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 CLCN6P51797 869 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 ATN1P54259 1190 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 PDE4CQ08493 712 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 FAM102AQ5T9C2 384 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 DCLRE1AQ6PJP8 1040 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 TMCO3Q6UWJ1 677 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 METTL23Q86XA0 190 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 ZDHHC17Q8IUH5 632 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 SLC2A14Q8TDB8 520 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 PAAF1Q9BRP4 392 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 SLC4A5Q9BY07 1137 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 CYLDQ9NQC7 956 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 METTL5Q9NRN9 209 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 DSEQ9UL01 958 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 PSMA2P25787 234 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 TIGD5Q53EQ6 642 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 NOMO2Q5JPE7 1267 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 OR6B2Q6IFH4 312 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 PMF1Q6P1K2 205 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 CC2D1AQ6P1N0 951 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 TMEM110Q86TL2 294 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 KLHL7Q8IXQ5 586 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 DBF4BQ8NFT6 615 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 TOX2Q96NM4 488 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 HNRNPABQ99729 332 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 HIPK3Q9H422 1215 aa16.56■□□□□ 0.24
HERPUD1-201ENST00000300302 IGFBP6P24592 240 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms