RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PAPOLAP51003 745 aaKnown RBP14.03□□□□□ -0.16
HPS3-201ENST00000296051 AUHQ13825 339 aaKnown RBP14.03□□□□□ -0.16
HPS3-201ENST00000296051 MROH9Q5TGP6 573 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 SNX30Q5VWJ9 437 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 BTNL9Q6UXG8 535 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 TMC7Q7Z402 723 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 TMEM121Q9BTD3 319 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 UBXN6Q9BZV1 441 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 PRMT7Q9NVM4 692 aaPredicted RBP14.03□□□□□ -0.16
HPS3-201ENST00000296051 IRF6O14896 467 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 RBP3P10745 1247 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 TYK2P29597 1187 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 SOX11P35716 441 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 SLC12A1Q13621 1099 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 CNGA2Q16280 664 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 MREGQ8N565 214 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 PGM2Q96G03 612 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 TSPYL2Q9H2G4 693 aaPredicted RBP14.02□□□□□ -0.16
HPS3-201ENST00000296051 AAASQ9NRG9 546 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 TMEM39AQ9NV64 488 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 PARVAQ9NVD7 372 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 NR2E3Q9Y5X4 410 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.02□□□□□ -0.16
HPS3-201ENST00000296051 H3BRB1 525 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 DNAJC8O75937 253 aaPredicted RBP14.02□□□□□ -0.16
HPS3-201ENST00000296051 GJB6O95452 261 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 NPTXRO95502 500 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 CYBBP04839 570 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 NOGQ13253 232 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 ALG3Q92685 438 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 HIC2Q96JB3 615 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 DHX35Q9H5Z1 703 aaKnown RBP14.02□□□□□ -0.16
HPS3-201ENST00000296051 TUT1Q9H6E5 874 aaKnown RBP14.02□□□□□ -0.16
HPS3-201ENST00000296051 DCLRE1BQ9H816 532 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 FAM49BQ9NUQ9 324 aa14.02□□□□□ -0.16
HPS3-201ENST00000296051 GRIN2DO15399 1336 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 MAP1BP46821 2468 aaKnown RBP14.02□□□□□ -0.17
HPS3-201ENST00000296051 ADCY3O60266 1144 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 ATP9AO75110 1047 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 ZC3H11AO75152 810 aaKnown RBP eCLIP14.02□□□□□ -0.17
HPS3-201ENST00000296051 DGKIO75912 1065 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 SEC24DO94855 1032 aaPredicted RBP14.02□□□□□ -0.17
HPS3-201ENST00000296051 MYL2P10916 166 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 DNAJB2P25686 324 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 VGLL4Q14135 290 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 DDX53Q86TM3 631 aaKnown RBP14.02□□□□□ -0.17
HPS3-201ENST00000296051 FAM71DQ8N9W8 422 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 TAS1R2Q8TE23 839 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 TNFRSF25Q93038 417 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 TRPV6Q9H1D0 765 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 XPNPEP3Q9NQH7 507 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 ZC3H4Q9UPT8 1303 aaKnown RBP14.02□□□□□ -0.17
HPS3-201ENST00000296051 KIAA0391O15091 583 aaKnown RBP14.02□□□□□ -0.17
HPS3-201ENST00000296051 CYP11B1P15538 503 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 IGFBP4P22692 258 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 PKN2Q16513 984 aaKnown RBP14.02□□□□□ -0.17
HPS3-201ENST00000296051 CYP4A22Q5TCH4 519 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 HGSNATQ68CP4 663 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 XRRA1Q6P2D8 792 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 NOTUMQ6P988 496 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 ANO5Q75V66 913 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 ZFPM1Q8IX07 1006 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 TEX9Q8N6V9 391 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 EXT2Q93063 718 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 C10orf88Q9H8K7 445 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 ERVK-5Q9HDB9 667 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 ASNSD1Q9NWL6 643 aa14.02□□□□□ -0.17
HPS3-201ENST00000296051 TRIM49D1C9J1S8 452 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 AIM2O14862 343 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 WEE2P0C1S8 567 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 KRT3P12035 628 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 ADORA2AP29274 412 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 CNGA3Q16281 694 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 GRIK5Q16478 980 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 PCNX4Q63HM2 1172 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 C4orf32Q8N8J7 132 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 TTC13Q8NBP0 860 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 GPRASP2Q96D09 838 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 SYNDIG1Q9H7V2 258 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 DDX4Q9NQI0 724 aaKnown RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 TBX3O15119 743 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 NKRFO15226 690 aaKnown RBP eCLIP14.01□□□□□ -0.17
HPS3-201ENST00000296051 KCNN4O15554 427 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 CALB1P05937 261 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 PRAMEP78395 509 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 RGMBQ6NW40 437 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 BZW1Q7L1Q6 419 aaKnown RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 EXOC3L1Q86VI1 746 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 ARHGEF19Q8IW93 802 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 RBBP8NLQ8NC74 664 aaPredicted RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 SERPINI1Q99574 410 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 ZC3H7BQ9UGR2 993 aaKnown RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 ZSCAN5DPP0CG00 497 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 SSTR1P30872 391 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 HNRNPH3P31942 346 aaKnown RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 SLC1A1P43005 524 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 MMP14P50281 582 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 STX3Q13277 289 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 CHI3L2Q15782 390 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 KYAT1Q16773 422 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms