RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 MYH10P35580 1976 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 LRRIQ3A6PVS8 624 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 CALUO43852 315 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 TRIM49P0CI25 452 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 TRIM49CP0CI26 452 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 HAPLN1P10915 354 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 CD46P15529 392 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 CD72P21854 359 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 PAX3P23760 479 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 FCARP24071 287 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 CYP2F1P24903 491 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 LMO2P25791 158 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 DLG4P78352 724 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 NUCB2P80303 420 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 CYP27A1Q02318 531 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 TCF15Q12870 199 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 IFRD2Q12894 506 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 UBXN2BQ14CS0 331 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 MLF2Q15773 248 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 DDR2Q16832 855 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 ZNF699Q32M78 642 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 ARHGAP15Q53QZ3 475 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 TDRD10Q5VZ19 366 aaKnown RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 TPRG1Q6ZUI0 275 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 GAREM2Q75VX8 874 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 DNAJB7Q7Z6W7 309 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 ITIH5Q86UX2 942 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 SPATA2LQ8IUW3 424 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 TOP6BLQ8N6T0 577 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 OR6B3Q8NGW1 331 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 TTC8Q8TAM2 541 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 GOLGA5Q8TBA6 731 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 SPPL2BQ8TCT7 592 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 KBTBD7Q8WVZ9 684 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 ZNF516Q92618 1163 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 PSMG2Q969U7 264 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 NXPE3Q969Y0 559 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 MYLPFQ96A32 169 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 EEF2KMTQ96G04 330 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 ASB16Q96NS5 453 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 MRPL45Q9BRJ2 306 aaKnown RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 GZF1Q9H116 711 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-201ENST00000291458 SNX25Q9H3E2 840 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 KCTD10Q9H3F6 313 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 SMYD3Q9H7B4 428 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 BRD9Q9H8M2 597 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 ZFP14Q9HCL3 533 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 TRPC7Q9HCX4 862 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 HEBP1Q9NRV9 189 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 GTF3C4Q9UKN8 822 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 COL4A2P08572 1712 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 MYO16Q9Y6X6 1858 aa10.47□□□□□ -0.73
CCDC58-201ENST00000291458 MYBPHLA2RUH7 354 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 HEPACAM2A8MVW5 462 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 PRAMEF12O95522 483 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 CST3P01034 146 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-201ENST00000291458 PRKCSHP14314 528 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-201ENST00000291458 AOC1P19801 751 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 NR2F2P24468 414 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 PCSK1P29120 753 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 GDI1P31150 447 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 PIK3CAP42336 1068 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 PSMD2Q13200 908 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 ORC1Q13415 861 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 WDR72Q3MJ13 1102 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 ISM2Q6H9L7 571 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 VITQ6UXI7 678 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 ALYREFQ86V81 257 aaKnown RBP10.46□□□□□ -0.73
CCDC58-201ENST00000291458 TMEM86AQ8N2M4 240 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 LEMD2Q8NC56 503 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 ATOH1Q92858 354 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-201ENST00000291458 SMARCD2Q92925 531 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 RSPRY1Q96DX4 576 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 ZFYVE19Q96K21 471 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 LRRC3Q9BY71 257 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 DPEP3Q9H4B8 488 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 CRTAC1Q9NQ79 661 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 AVENQ9NQS1 362 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-201ENST00000291458 SLC2A4RGQ9NR83 387 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 GDAP2Q9NXN4 497 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 WNT16Q9UBV4 365 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 MAFFQ9ULX9 164 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 NDRG2Q9UN36 371 aaKnown RBP10.46□□□□□ -0.73
CCDC58-201ENST00000291458 FRMD4BQ9Y2L6 1034 aa10.46□□□□□ -0.73
CCDC58-201ENST00000291458 GREB1Q4ZG55 1949 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 FAM237AA0A1B0GTK4 181 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 ECI2O75521 394 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 RHOBTB3O94955 611 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 MYL1P05976 194 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 BDNFP23560 247 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 CDC25CP30307 473 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 LHX1P48742 406 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 TUFMP49411 452 aaKnown RBP10.45□□□□□ -0.74
CCDC58-201ENST00000291458 EPHA5P54756 1037 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 SNRPFP62306 86 aaKnown RBP10.45□□□□□ -0.74
CCDC58-201ENST00000291458 NCOA4Q13772 614 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 NFE2Q16621 373 aaPredicted RBP10.45□□□□□ -0.74
CCDC58-201ENST00000291458 SPOPLQ6IQ16 392 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 C12orf56Q8IXR9 622 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms